2gnn

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Current revision (07:38, 9 October 2024) (edit) (undo)
 
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<StructureSection load='2gnn' size='340' side='right'caption='[[2gnn]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
<StructureSection load='2gnn' size='340' side='right'caption='[[2gnn]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2gnn]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Orfn2 Orfn2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GNN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GNN FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2gnn]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Orf_virus_(strain_NZ2) Orf virus (strain NZ2)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GNN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GNN FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BEN:BENZAMIDINE'>BEN</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1vpf|1vpf]], [[1fzv|1fzv]], [[1wq8|1wq8]], [[1wq9|1wq9]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BEN:BENZAMIDINE'>BEN</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gnn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gnn OCA], [https://pdbe.org/2gnn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gnn RCSB], [https://www.ebi.ac.uk/pdbsum/2gnn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gnn ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gnn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gnn OCA], [https://pdbe.org/2gnn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gnn RCSB], [https://www.ebi.ac.uk/pdbsum/2gnn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gnn ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/VEGFH_ORFN2 VEGFH_ORFN2]] Induces endothelial proliferation.
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[https://www.uniprot.org/uniprot/VEGFH_ORFN2 VEGFH_ORFN2] Induces endothelial proliferation.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gn/2gnn_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gn/2gnn_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Orfn2]]
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[[Category: Ballmer-Hofer K]]
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[[Category: Ballmer-Hofer, K]]
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[[Category: Kostrewa D]]
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[[Category: Kostrewa, D]]
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[[Category: Pieren M]]
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[[Category: Pieren, M]]
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[[Category: Prota AE]]
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[[Category: Prota, A E]]
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[[Category: Wagner A]]
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[[Category: Wagner, A]]
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[[Category: Winkler FK]]
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[[Category: Winkler, F K]]
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[[Category: Hormone-growth factor complex]]
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[[Category: Orf]]
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[[Category: S-sad]]
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[[Category: Vegf]]
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Current revision

Crystal Structure of the Orf Virus NZ2 Variant of VEGF-E

PDB ID 2gnn

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