3dqp

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Current revision (07:55, 9 October 2024) (edit) (undo)
 
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<StructureSection load='3dqp' size='340' side='right'caption='[[3dqp]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
<StructureSection load='3dqp' size='340' side='right'caption='[[3dqp]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3dqp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"lactococcus_lactis_subsp._diacitilactis_(sic)"_(garvie_and_farrow_1982)_schleifer_et_al._1986 "lactococcus lactis subsp. diacitilactis (sic)" (garvie and farrow 1982) schleifer et al. 1986]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DQP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DQP FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3dqp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactococcus_lactis_subsp._lactis Lactococcus lactis subsp. lactis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DQP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DQP FirstGlance]. <br>
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</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.4&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ylbE, LL1109, L119, L119013 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1360 "Lactococcus lactis subsp. diacitilactis (sic)" (Garvie and Farrow 1982) Schleifer et al. 1986])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dqp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dqp OCA], [https://pdbe.org/3dqp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dqp RCSB], [https://www.ebi.ac.uk/pdbsum/3dqp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dqp ProSAT], [https://www.topsan.org/Proteins/NESGC/3dqp TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dqp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dqp OCA], [https://pdbe.org/3dqp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dqp RCSB], [https://www.ebi.ac.uk/pdbsum/3dqp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dqp ProSAT], [https://www.topsan.org/Proteins/NESGC/3dqp TOPSAN]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q9CGI7_LACLA Q9CGI7_LACLA]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dq/3dqp_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dq/3dqp_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Lactococcus lactis subsp. lactis]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Acton, T B]]
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[[Category: Acton TB]]
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[[Category: Ciccosanti, C]]
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[[Category: Ciccosanti C]]
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[[Category: Everett, J K]]
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[[Category: Everett JK]]
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[[Category: Foote, E L]]
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[[Category: Foote EL]]
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[[Category: Forouhar, F]]
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[[Category: Forouhar F]]
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[[Category: Hunt, J F]]
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[[Category: Hunt JF]]
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[[Category: Lee, D]]
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[[Category: Lee D]]
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[[Category: Mao, L]]
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[[Category: Mao L]]
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[[Category: Montelione, G T]]
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[[Category: Montelione GT]]
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[[Category: Structural genomic]]
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[[Category: Neely H]]
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[[Category: Neely, H]]
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[[Category: Seetharaman J]]
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[[Category: Seetharaman, J]]
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[[Category: Tong L]]
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[[Category: Tong, L]]
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[[Category: Xiao R]]
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[[Category: Xiao, R]]
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[[Category: Alpha-beta protein]]
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[[Category: Nesg]]
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[[Category: Oxidoreductase]]
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[[Category: PSI, Protein structure initiative]]
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Current revision

Crystal structure of the oxidoreductase ylbE from Lactococcus lactis, Northeast Structural Genomics Consortium Target KR121.

PDB ID 3dqp

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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