6fu4
From Proteopedia
(Difference between revisions)
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==Ligand binding domain (LBD) of the p. aeruginosa histamine receptor TlpQ== | ==Ligand binding domain (LBD) of the p. aeruginosa histamine receptor TlpQ== | ||
- | <StructureSection load='6fu4' size='340' side='right' caption='[[6fu4]], [[Resolution|resolution]] 2.45Å' scene=''> | + | <StructureSection load='6fu4' size='340' side='right'caption='[[6fu4]], [[Resolution|resolution]] 2.45Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[6fu4]] is a 4 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[6fu4]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_PAO1 Pseudomonas aeruginosa PAO1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6FU4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6FU4 FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HSM:HISTAMINE'>HSM</scene>, <scene name='pdbligand= | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.45Å</td></tr> |
- | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HSM:HISTAMINE'>HSM</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> | |
- | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6fu4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6fu4 OCA], [https://pdbe.org/6fu4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6fu4 RCSB], [https://www.ebi.ac.uk/pdbsum/6fu4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6fu4 ProSAT]</span></td></tr> | |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/TLPQ_PSEAE TLPQ_PSEAE] Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of methylation. TlpQ is a chemoreceptor that binds and mediates chemotaxis to histamine, a key biological signaling molecule. It binds histamine with high affinity, which permits responses to very low histamine concentrations (PubMed:30425146). Chemotaxis to histamine may play a role in the virulence of P.aeruginosa by recruiting cells at the infection site and consequently modulating the expression of quorum-sensing-dependent virulence genes (Probable). TlpQ also binds and mediates chemotaxis to polyamines such as putrescine, spermidine, cadaverine, agmatine and ethylenediamine (PubMed:30425146). In addition, binds the quorum-sensing signal autoinducer 2 (AI-2), thus inducing chemotaxis toward AI-2 and biofilm formation (PubMed:33097715).<ref>PMID:30425146</ref> <ref>PMID:33097715</ref> <ref>PMID:30425146</ref> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: | + | [[Category: Large Structures]] |
- | [[Category: Conejero-Muriel | + | [[Category: Pseudomonas aeruginosa PAO1]] |
- | [[Category: Corral-Lugo | + | [[Category: Conejero-Muriel M]] |
- | [[Category: Gavira | + | [[Category: Corral-Lugo A]] |
- | + | [[Category: Gavira JA]] | |
- | [[Category: Krell | + | [[Category: Krell T]] |
- | [[Category: Martin-Mora | + | [[Category: Martin-Mora D]] |
- | [[Category: Matilla | + | [[Category: Matilla MA]] |
- | [[Category: Torres | + | [[Category: Mesa Torres N]] |
- | [[Category: | + | [[Category: Silva Jimenez H]] |
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Current revision
Ligand binding domain (LBD) of the p. aeruginosa histamine receptor TlpQ
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