6wiv

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Current revision (09:15, 9 October 2024) (edit) (undo)
 
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<StructureSection load='6wiv' size='340' side='right'caption='[[6wiv]], [[Resolution|resolution]] 3.30&Aring;' scene=''>
<StructureSection load='6wiv' size='340' side='right'caption='[[6wiv]], [[Resolution|resolution]] 3.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6wiv]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6WIV OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6WIV FirstGlance]. <br>
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<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6WIV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6WIV FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CLR:CHOLESTEROL'>CLR</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=U3D:[(2R)-3-[(Z)-icos-11-enoyl]oxy-2-[(Z)-octadec-9-enoyl]oxypropyl]+2-(trimethylazaniumyl)ethyl+phosphate'>U3D</scene>, <scene name='pdbligand=U3G:(2R)-3-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-{[(9Z)-octadec-9-enoyl]oxy}propyl+(5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenoate'>U3G</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.3&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GABBR1, GPRC3A ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN]), GABBR2, GPR51, GPRC3B ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CLR:CHOLESTEROL'>CLR</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=U3D:[(2R)-3-[(Z)-icos-11-enoyl]oxy-2-[(Z)-octadec-9-enoyl]oxypropyl]+2-(trimethylazaniumyl)ethyl+phosphate'>U3D</scene>, <scene name='pdbligand=U3G:(2R)-3-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-{[(9Z)-octadec-9-enoyl]oxy}propyl+(5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenoate'>U3G</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6wiv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6wiv OCA], [http://pdbe.org/6wiv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6wiv RCSB], [http://www.ebi.ac.uk/pdbsum/6wiv PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6wiv ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6wiv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6wiv OCA], [https://pdbe.org/6wiv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6wiv RCSB], [https://www.ebi.ac.uk/pdbsum/6wiv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6wiv ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
 
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[[http://www.uniprot.org/uniprot/GABR1_HUMAN GABR1_HUMAN]] Component of a heterodimeric G-protein coupled receptor for GABA, formed by GABBR1 and GABBR2. Within the heterodimeric GABA receptor, only GABBR1 seems to bind agonists, while GABBR2 mediates coupling to G proteins. Ligand binding causes a conformation change that triggers signaling via guanine nucleotide-binding proteins (G proteins) and modulates the activity of down-stream effectors, such as adenylate cyclase. Signaling inhibits adenylate cyclase, stimulates phospholipase A2, activates potassium channels, inactivates voltage-dependent calcium-channels and modulates inositol phospholipid hydrolysis. Calcium is required for high affinity binding to GABA. Plays a critical role in the fine-tuning of inhibitory synaptic transmission. Pre-synaptic GABA receptor inhibits neurotransmitter release by down-regulating high-voltage activated calcium channels, whereas postsynaptic GABA receptor decreases neuronal excitability by activating a prominent inwardly rectifying potassium (Kir) conductance that underlies the late inhibitory postsynaptic potentials. Not only implicated in synaptic inhibition but also in hippocampal long-term potentiation, slow wave sleep, muscle relaxation and antinociception. Activated by (-)-baclofen, cgp27492 and blocked by phaclofen.<ref>PMID:9844003</ref> <ref>PMID:9872316</ref> <ref>PMID:18165688</ref> <ref>PMID:22660477</ref> Isoform 1E may regulate the formation of functional GABBR1/GABBR2 heterodimers by competing for GABBR2 binding. This could explain the observation that certain small molecule ligands exhibit differential affinity for central versus peripheral sites.<ref>PMID:9844003</ref> <ref>PMID:9872316</ref> <ref>PMID:18165688</ref> <ref>PMID:22660477</ref> [[http://www.uniprot.org/uniprot/GABR2_HUMAN GABR2_HUMAN]] Component of a heterodimeric G-protein coupled receptor for GABA, formed by GABBR1 and GABBR2. Within the heterodimeric GABA receptor, only GABBR1 seems to bind agonists, while GABBR2 mediates coupling to G proteins. Ligand binding causes a conformation change that triggers signaling via guanine nucleotide-binding proteins (G proteins) and modulates the activity of down-stream effectors, such as adenylate cyclase. Signaling inhibits adenylate cyclase, stimulates phospholipase A2, activates potassium channels, inactivates voltage-dependent calcium-channels and modulates inositol phospholipid hydrolysis. Plays a critical role in the fine-tuning of inhibitory synaptic transmission. Pre-synaptic GABA receptor inhibits neurotransmitter release by down-regulating high-voltage activated calcium channels, whereas postsynaptic GABA receptor decreases neuronal excitability by activating a prominent inwardly rectifying potassium (Kir) conductance that underlies the late inhibitory postsynaptic potentials. Not only implicated in synaptic inhibition but also in hippocampal long-term potentiation, slow wave sleep, muscle relaxation and antinociception.<ref>PMID:9872316</ref> <ref>PMID:10328880</ref> <ref>PMID:18165688</ref> <ref>PMID:22660477</ref>
 
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Human]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Cao, B]]
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[[Category: Cao B]]
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[[Category: Chen, S]]
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[[Category: Chen S]]
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[[Category: Clarke, O B]]
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[[Category: Clarke OB]]
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[[Category: Eng, E T]]
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[[Category: Eng ET]]
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[[Category: Fan, Q R]]
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[[Category: Fan QR]]
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[[Category: Fiehn, O]]
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[[Category: Fiehn O]]
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[[Category: Frangaj, A]]
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[[Category: Frangaj A]]
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[[Category: Frank, J]]
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[[Category: Frank J]]
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[[Category: Fu, Z]]
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[[Category: Fu Z]]
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[[Category: Geng, Y]]
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[[Category: Geng Y]]
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[[Category: Grassucci, R]]
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[[Category: Grassucci R]]
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[[Category: Graziano, J]]
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[[Category: Graziano J]]
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[[Category: Hendrickson, W A]]
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[[Category: Hendrickson WA]]
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[[Category: Huang, R K]]
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[[Category: Huang RK]]
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[[Category: Javitch, J A]]
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[[Category: Javitch JA]]
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[[Category: Kloss, B]]
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[[Category: Kloss B]]
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[[Category: Kou, Y]]
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[[Category: Kou Y]]
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[[Category: Lin, X]]
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[[Category: Lin X]]
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[[Category: Liu, J]]
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[[Category: Liu J]]
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[[Category: Liu, Z]]
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[[Category: Liu Z]]
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[[Category: Mosyak, L]]
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[[Category: Mosyak L]]
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[[Category: Park, J]]
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[[Category: Park J]]
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[[Category: Quick, M]]
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[[Category: Quick M]]
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[[Category: Ray, K M]]
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[[Category: Ray KM]]
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[[Category: Rice, W J]]
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[[Category: Rice WJ]]
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[[Category: Shen, T]]
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[[Category: Shen T]]
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[[Category: Slavkovich, V N]]
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[[Category: Slavkovich VN]]
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[[Category: Slesinger, P A]]
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[[Category: Slesinger PA]]
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[[Category: Soni, R K]]
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[[Category: Soni RK]]
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[[Category: Taura, J]]
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[[Category: Taura J]]
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[[Category: Williams, J P]]
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[[Category: Williams JP]]
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[[Category: Yu, H]]
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[[Category: Yu H]]
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[[Category: Yu, Z]]
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[[Category: Yu Z]]
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[[Category: Zuo, H]]
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[[Category: Zuo H]]
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[[Category: Class c gpcr]]
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[[Category: Gaba]]
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[[Category: Inhibitory neurotransmission]]
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[[Category: Membrane protein]]
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[[Category: Phospholipid]]
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Current revision

Structure of human GABA(B) receptor in an inactive state

PDB ID 6wiv

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