7rb4

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Current revision (09:34, 9 October 2024) (edit) (undo)
 
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<StructureSection load='7rb4' size='340' side='right'caption='[[7rb4]], [[Resolution|resolution]] 2.19&Aring;' scene=''>
<StructureSection load='7rb4' size='340' side='right'caption='[[7rb4]], [[Resolution|resolution]] 2.19&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[7rb4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Seinonella_peptonophila Seinonella peptonophila]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7RB4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7RB4 FirstGlance]. <br>
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<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7RB4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7RB4 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.19&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7rb4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7rb4 OCA], [https://pdbe.org/7rb4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7rb4 RCSB], [https://www.ebi.ac.uk/pdbsum/7rb4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7rb4 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7rb4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7rb4 OCA], [https://pdbe.org/7rb4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7rb4 RCSB], [https://www.ebi.ac.uk/pdbsum/7rb4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7rb4 ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
 
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[https://www.uniprot.org/uniprot/A0A1M4ZWA4_9BACL A0A1M4ZWA4_9BACL]
 
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<div style="background-color:#fffaf0;">
 
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== Publication Abstract from PubMed ==
 
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Diphtheria toxin (DT) is the archetype for bacterial exotoxins implicated in human diseases and has played a central role in defining the field of toxinology since its discovery in 1888. Despite being one of the most extensively characterized bacterial toxins, the origins and evolutionary adaptation of DT to human hosts remain unknown. Here, we determined the first high-resolution structures of DT homologs outside of the Corynebacterium genus. DT homologs from Streptomyces albireticuli (17% identity to DT) and Seinonella peptonophila (20% identity to DT), despite showing no toxicity toward human cells, display significant structural similarities to DT sharing both the overall Y-shaped architecture of DT as well as the individual folds of each domain. Through a systematic investigation of individual domains, we show that the functional determinants of host range extend beyond an inability to bind cellular receptors; major differences in pH-induced pore-formation and cytosolic release further dictate the delivery of toxic catalytic moieties into cells, thus providing multiple mechanisms for a conserved structural fold to adapt to different hosts. Our work provides structural insights into the expanding DT family of toxins, and highlights key transitions required for host adaptation.
 
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Structures of distant diphtheria toxin homologs reveal functional determinants of an evolutionarily conserved toxin scaffold.,Sugiman-Marangos SN, Gill SK, Mansfield MJ, Orrell KE, Doxey AC, Melnyk RA Commun Biol. 2022 Apr 19;5(1):375. doi: 10.1038/s42003-022-03333-9. PMID:35440624<ref>PMID:35440624</ref>
 
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
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</div>
 
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<div class="pdbe-citations 7rb4" style="background-color:#fffaf0;"></div>
 
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== References ==
 
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<references/>
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Seinonella peptonophila]]
 
[[Category: Gill SK]]
[[Category: Gill SK]]
[[Category: Melnyk RA]]
[[Category: Melnyk RA]]
[[Category: Sugiman-Marangos SN]]
[[Category: Sugiman-Marangos SN]]

Current revision

Crystal structure of Peptono Toxin, a diphtheria toxin homolog, from Seinonella peptonophila

PDB ID 7rb4

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