8i7v
From Proteopedia
(Difference between revisions)
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| - | == | + | ==Cryo-EM structure of Acipimox bound human hydroxy-carboxylic acid receptor 2 in complex with Gi heterotrimer== |
| - | <StructureSection load='8i7v' size='340' side='right'caption='[[8i7v]]' scene=''> | + | <StructureSection load='8i7v' size='340' side='right'caption='[[8i7v]], [[Resolution|resolution]] 2.77Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8I7V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8I7V FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[8i7v]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8I7V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8I7V FirstGlance]. <br> |
| - | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy</td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 2.77Å</td></tr> |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=OJX:5-methyl-4-oxidanyl-pyrazin-4-ium-2-carboxylic+acid'>OJX</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8i7v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8i7v OCA], [https://pdbe.org/8i7v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8i7v RCSB], [https://www.ebi.ac.uk/pdbsum/8i7v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8i7v ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8i7v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8i7v OCA], [https://pdbe.org/8i7v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8i7v RCSB], [https://www.ebi.ac.uk/pdbsum/8i7v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8i7v ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Hydroxycarboxylic acid receptors (HCAR1, HCAR2, and HCAR3) transduce G(i/o) signaling upon biding to molecules such as lactic acid, butyric acid and 3-hydroxyoctanoic acid, which are associated with lipolytic and atherogenic activity, and neuroinflammation. Although many reports have elucidated the function of HCAR2 and its potential as a therapeutic target for treating not only dyslipidemia but also neuroimmune disorders such as multiple sclerosis and Parkinson's disease, the structural basis of ligand recognition and ligand-induced G(i)-coupling remains unclear. Here we report three cryo-EM structures of the human HCAR2-G(i) signaling complex, each bound with different ligands: niacin, acipimox or GSK256073. All three agonists are held in a deep pocket lined by residues that are not conserved in HCAR1 and HCAR3. A distinct hairpin loop at the HCAR2 N-terminus and extra-cellular loop 2 (ECL2) completely enclose the ligand. These structures also reveal the agonist-induced conformational changes propagated to the G-protein-coupling interface during activation. Collectively, the structures presented here are expected to help in the design of ligands specific for HCAR2, leading to new drugs for the treatment of various diseases such as dyslipidemia and inflammation. | ||
| + | |||
| + | Structural basis for ligand recognition and signaling of hydroxy-carboxylic acid receptor 2.,Park JH, Kawakami K, Ishimoto N, Ikuta T, Ohki M, Ekimoto T, Ikeguchi M, Lee DS, Lee YH, Tame JRH, Inoue A, Park SY Nat Commun. 2023 Nov 6;14(1):7150. doi: 10.1038/s41467-023-42764-8. PMID:37932263<ref>PMID:37932263</ref> | ||
| + | |||
| + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| + | </div> | ||
| + | <div class="pdbe-citations 8i7v" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Homo sapiens]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: N | + | [[Category: Mus musculus]] |
| + | [[Category: Ishimoto N]] | ||
| + | [[Category: Park JH]] | ||
| + | [[Category: Park SY]] | ||
Current revision
Cryo-EM structure of Acipimox bound human hydroxy-carboxylic acid receptor 2 in complex with Gi heterotrimer
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