2oyz
From Proteopedia
(Difference between revisions)
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<StructureSection load='2oyz' size='340' side='right'caption='[[2oyz]], [[Resolution|resolution]] 1.71Å' scene=''> | <StructureSection load='2oyz' size='340' side='right'caption='[[2oyz]], [[Resolution|resolution]] 1.71Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2oyz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[2oyz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_parahaemolyticus_RIMD_2210633 Vibrio parahaemolyticus RIMD 2210633]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OYZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OYZ FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.71Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2oyz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2oyz OCA], [https://pdbe.org/2oyz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2oyz RCSB], [https://www.ebi.ac.uk/pdbsum/2oyz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2oyz ProSAT], [https://www.topsan.org/Proteins/MCSG/2oyz TOPSAN]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2oyz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2oyz OCA], [https://pdbe.org/2oyz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2oyz RCSB], [https://www.ebi.ac.uk/pdbsum/2oyz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2oyz ProSAT], [https://www.topsan.org/Proteins/MCSG/2oyz TOPSAN]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/PPNP_VIBPA PPNP_VIBPA] Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.[HAMAP-Rule:MF_01537] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oy/2oyz_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oy/2oyz_consurf.spt"</scriptWhenChecked> | ||
| - | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> |
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: | + | [[Category: Vibrio parahaemolyticus RIMD 2210633]] |
| - | [[Category: Abdullah | + | [[Category: Abdullah J]] |
| - | [[Category: Chang | + | [[Category: Chang C]] |
| - | [[Category: Joachimiak | + | [[Category: Joachimiak A]] |
| - | + | [[Category: Volkart L]] | |
| - | [[Category: Volkart | + | |
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Current revision
Crystal structure of unknown function protein VPA0057 from Vibrio parahaemolyticus (targeted domain 2-94)
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