2pk7

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (05:26, 17 October 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='2pk7' size='340' side='right'caption='[[2pk7]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
<StructureSection load='2pk7' size='340' side='right'caption='[[2pk7]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2pk7]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Psef5 Psef5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PK7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PK7 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2pk7]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_protegens_Pf-5 Pseudomonas protegens Pf-5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PK7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PK7 FirstGlance]. <br>
-
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2hf1|2hf1]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PFL_1779 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=220664 PSEF5])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pk7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pk7 OCA], [https://pdbe.org/2pk7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pk7 RCSB], [https://www.ebi.ac.uk/pdbsum/2pk7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pk7 ProSAT], [https://www.topsan.org/Proteins/NESGC/2pk7 TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pk7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pk7 OCA], [https://pdbe.org/2pk7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pk7 RCSB], [https://www.ebi.ac.uk/pdbsum/2pk7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pk7 ProSAT], [https://www.topsan.org/Proteins/NESGC/2pk7 TOPSAN]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Y1779_PSEF5 Y1779_PSEF5]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 14: Line 15:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pk/2pk7_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pk/2pk7_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 22: Line 23:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Psef5]]
+
[[Category: Pseudomonas protegens Pf-5]]
-
[[Category: Acton, T]]
+
[[Category: Acton T]]
-
[[Category: Chen, C X]]
+
[[Category: Chen CX]]
-
[[Category: Hunt, J F]]
+
[[Category: Hunt JF]]
-
[[Category: Janjua, H]]
+
[[Category: Janjua H]]
-
[[Category: Jayaraman, S]]
+
[[Category: Jayaraman S]]
-
[[Category: Montelione, G T]]
+
[[Category: Montelione GT]]
-
[[Category: Structural genomic]]
+
[[Category: Neely H]]
-
[[Category: Neely, H]]
+
[[Category: Tong L]]
-
[[Category: Tong, L]]
+
[[Category: Vorobiev SM]]
-
[[Category: Vorobiev, S M]]
+
[[Category: Xiao R]]
-
[[Category: Xiao, R]]
+
-
[[Category: Nesg]]
+
-
[[Category: Plr1]]
+
-
[[Category: PSI, Protein structure initiative]]
+
-
[[Category: Putative tetraacyldisaccharide-1-p 4-kinase]]
+
-
[[Category: Q4kft4]]
+
-
[[Category: Unknown function]]
+

Current revision

Crystal structure of the Q4KFT4_PSEF5 protein from Pseudomonas fluorescens. NESG target PlR1

PDB ID 2pk7

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools