5yad

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Current revision (07:46, 17 October 2024) (edit) (undo)
 
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==Crystal structure of Marf1 Lotus domain from Mus musculus==
==Crystal structure of Marf1 Lotus domain from Mus musculus==
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<StructureSection load='5yad' size='340' side='right' caption='[[5yad]], [[Resolution|resolution]] 1.76&Aring;' scene=''>
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<StructureSection load='5yad' size='340' side='right'caption='[[5yad]], [[Resolution|resolution]] 1.76&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5yad]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5YAD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5YAD FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5yad]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5YAD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5YAD FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.76&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Marf1, Kiaa0430, Lkap ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5yad FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5yad OCA], [https://pdbe.org/5yad PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5yad RCSB], [https://www.ebi.ac.uk/pdbsum/5yad PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5yad ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5yad FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5yad OCA], [http://pdbe.org/5yad PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5yad RCSB], [http://www.ebi.ac.uk/pdbsum/5yad PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5yad ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/MARF1_MOUSE MARF1_MOUSE]] Essential regulator of oogenesis required for female meiotic progression to repress transposable elements and preventing their mobilization, which is essential for the germline integrity. Probably acts via some RNA metabolic process, equivalent to the piRNA system in males, which mediates the repression of transposable elements during meiosis by forming complexes composed of RNAs and governs the methylation and subsequent repression of transposons. Also required to protect from DNA double-strand breaks.<ref>PMID:22442484</ref> <ref>PMID:23090997</ref>
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[https://www.uniprot.org/uniprot/MARF1_MOUSE MARF1_MOUSE] Essential regulator of oogenesis required for female meiotic progression to repress transposable elements and preventing their mobilization, which is essential for the germline integrity. Probably acts via some RNA metabolic process, equivalent to the piRNA system in males, which mediates the repression of transposable elements during meiosis by forming complexes composed of RNAs and governs the methylation and subsequent repression of transposons. Also required to protect from DNA double-strand breaks.<ref>PMID:22442484</ref> <ref>PMID:23090997</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Lk3 transgenic mice]]
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[[Category: Large Structures]]
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[[Category: Ma, J B]]
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[[Category: Mus musculus]]
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[[Category: Wu, B X]]
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[[Category: Ma JB]]
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[[Category: Yao, Q Q]]
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[[Category: Wu BX]]
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[[Category: Lotus domain]]
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[[Category: Yao QQ]]
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[[Category: Marf1]]
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[[Category: Meiosis]]
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[[Category: Rna binding]]
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[[Category: Rna binding protein]]
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Current revision

Crystal structure of Marf1 Lotus domain from Mus musculus

PDB ID 5yad

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