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| | <StructureSection load='5ze8' size='340' side='right'caption='[[5ze8]], [[Resolution|resolution]] 1.60Å' scene=''> | | <StructureSection load='5ze8' size='340' side='right'caption='[[5ze8]], [[Resolution|resolution]] 1.60Å' scene=''> |
| | == Structural highlights == | | == Structural highlights == |
| - | <table><tr><td colspan='2'>[[5ze8]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermochromatium_tepidum Thermochromatium tepidum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ZE8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ZE8 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[5ze8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermochromatium_tepidum Thermochromatium tepidum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ZE8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5ZE8 FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6Å</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ze8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ze8 OCA], [http://pdbe.org/5ze8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ze8 RCSB], [http://www.ebi.ac.uk/pdbsum/5ze8 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ze8 ProSAT]</span></td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
| | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ze8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ze8 OCA], [https://pdbe.org/5ze8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ze8 RCSB], [https://www.ebi.ac.uk/pdbsum/5ze8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ze8 ProSAT]</span></td></tr> |
| | </table> | | </table> |
| | + | == Function == |
| | + | [https://www.uniprot.org/uniprot/A0A2P1N6U9_THETI A0A2P1N6U9_THETI] |
| | <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| | == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| | [[Category: Large Structures]] | | [[Category: Large Structures]] |
| | [[Category: Thermochromatium tepidum]] | | [[Category: Thermochromatium tepidum]] |
| - | [[Category: Chen, J H]] | + | [[Category: Chen J-H]] |
| - | [[Category: Shen, J R]] | + | [[Category: Shen J-R]] |
| - | [[Category: Yu, L J]] | + | [[Category: Yu L-J]] |
| - | [[Category: Cytochrome c]]
| + | |
| - | [[Category: Multiheme]]
| + | |
| - | [[Category: Photosynthesis]]
| + | |
| - | [[Category: Purple sulfur bacteria]]
| + | |
| Structural highlights
Function
A0A2P1N6U9_THETI
Publication Abstract from PubMed
The thermophilic purple sulfur bacterium Thermochromatium tepidum possesses four main water-soluble redox proteins involved in the electron transfer behavior. Crystal structures have been reported for three of them: a high potential iron-sulfur protein, cytochrome c', and one of two low-potential cytochrome c 552 (which is a flavocytochrome c) have been determined. In this study, we purified another low-potential cytochrome c 552 (LPC), determined its N-terminal amino acid sequence and the whole gene sequence, characterized it with absorption and electron paramagnetic spectroscopy, and solved its high-resolution crystal structure. This novel cytochrome was found to contain five c-type hemes. The overall fold of LPC consists of two distinct domains, one is the five heme-containing domain and the other one is an Ig-like domain. This provides a representative example for the structures of multiheme cytochromes containing an odd number of hemes, although the structures of multiheme cytochromes with an even number of hemes are frequently seen in the PDB database. Comparison of the sequence and structure of LPC with other proteins in the databases revealed several characteristic features which may be important for its functioning. Based on the results obtained, we discuss the possible intracellular function of this LPC in Tch. tepidum.
Properties and structure of a low-potential, penta-heme cytochrome c 552 from a thermophilic purple sulfur photosynthetic bacterium Thermochromatium tepidum.,Chen JH, Yu LJ, Boussac A, Wang-Otomo ZY, Kuang T, Shen JR Photosynth Res. 2018 Apr 24. pii: 10.1007/s11120-018-0507-y. doi:, 10.1007/s11120-018-0507-y. PMID:29691716[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Chen JH, Yu LJ, Boussac A, Wang-Otomo ZY, Kuang T, Shen JR. Properties and structure of a low-potential, penta-heme cytochrome c 552 from a thermophilic purple sulfur photosynthetic bacterium Thermochromatium tepidum. Photosynth Res. 2018 Apr 24. pii: 10.1007/s11120-018-0507-y. doi:, 10.1007/s11120-018-0507-y. PMID:29691716 doi:http://dx.doi.org/10.1007/s11120-018-0507-y
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