6fuz

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==Crystal structure of the TPR domain of KLC1 in complex with the C-terminal peptide of JIP1==
==Crystal structure of the TPR domain of KLC1 in complex with the C-terminal peptide of JIP1==
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<StructureSection load='6fuz' size='340' side='right' caption='[[6fuz]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
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<StructureSection load='6fuz' size='340' side='right'caption='[[6fuz]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6fuz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human] and [http://en.wikipedia.org/wiki/Lama Lama]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6FUZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6FUZ FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6fuz]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens], [https://en.wikipedia.org/wiki/Lama_glama Lama glama] and [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6FUZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6FUZ FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">MAPK8IP1, IB1, JIP1, PRKM8IP ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6fuz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6fuz OCA], [http://pdbe.org/6fuz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6fuz RCSB], [http://www.ebi.ac.uk/pdbsum/6fuz PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6fuz ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6fuz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6fuz OCA], [https://pdbe.org/6fuz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6fuz RCSB], [https://www.ebi.ac.uk/pdbsum/6fuz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6fuz ProSAT]</span></td></tr>
</table>
</table>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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Kinesin-mediated cargo transport is required for many cellular functions and plays a key role in pathological processes. Structural information on how kinesins recognize their cargoes is required for a molecular understanding of this fundamental and ubiquitous process. Here, we present the crystal structure of the tetratricopeptide repeat of kinesin light chain 2 in complex with a cargo peptide harboring a 'tryptophan-acidic' motif derived from SKIP, a critical host determinant in Salmonella pathogenesis and a regulator of lysosomal positioning. Structural data together with biophysical, biochemical, and cellular assays allow us to propose a framework for intracellular transport based on the binding by kinesin-1 of W-acidic cargo motifs through a combination of electrostatic interactions and sequence-specific elements, providing direct molecular evidence of the mechanisms for kinesin-1:cargo recognition.
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The light chains (KLCs) of the heterotetrameric microtubule motor kinesin-1, that bind to cargo adaptor proteins and regulate its activity, have a capacity to recognize short peptides via their tetratricopeptide repeat domains (KLC(TPR)). Here, using X-ray crystallography, we show how kinesin-1 recognizes a novel class of adaptor motifs that we call 'Y-acidic' (tyrosine flanked by acidic residues), in a KLC-isoform-specific manner. Binding specificities of Y-acidic motifs (present in JIP1 and in TorsinA) to KLC1(TPR) are distinct from those utilized for the recognition of W-acidic motifs, found in adaptors, that are KLC-isoform non-selective. However, a partial overlap on their receptor-binding sites implies that adaptors relying on Y-acidic and W-acidic motifs must act independently. We propose a model to explain why these two classes of motifs that bind to the concave surface of KLC(TPR) with similar low micromolar affinity can exhibit different capacities to promote kinesin-1 activity.
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Structural Basis For Kinesin-1:Cargo Recognition.,Pernigo S, Lamprecht A, Steiner RA, Dodding MP Science. 2013 Mar 21. PMID:23519214<ref>PMID:23519214</ref>
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Structural basis for isoform-specific kinesin-1 recognition of Y-acidic cargo adaptors.,Pernigo S, Chegkazi MS, Yip YY, Treacy C, Glorani G, Hansen K, Politis A, Bui S, Dodding MP, Steiner RA Elife. 2018 Oct 15;7:e38362. doi: 10.7554/eLife.38362. PMID:30320553<ref>PMID:30320553</ref>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
<div class="pdbe-citations 6fuz" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 6fuz" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Kinesin 3D Structures|Kinesin 3D Structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Human]]
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[[Category: Homo sapiens]]
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[[Category: Lama]]
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[[Category: Lama glama]]
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[[Category: Dodding, M P]]
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[[Category: Large Structures]]
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[[Category: Pernigo, S]]
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[[Category: Mus musculus]]
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[[Category: Steiner, R A]]
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[[Category: Dodding MP]]
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[[Category: Cargo recognition]]
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[[Category: Pernigo S]]
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[[Category: Motor protein]]
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[[Category: Steiner RA]]
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[[Category: Nanobody]]
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[[Category: Protein complex]]
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Current revision

Crystal structure of the TPR domain of KLC1 in complex with the C-terminal peptide of JIP1

PDB ID 6fuz

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