We apologize for Proteopedia being slow to respond. For the past two years, a new implementation of Proteopedia has been being built. Soon, it will replace this 18-year old system. All existing content will be moved to the new system at a date that will be announced here.

1tlf

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
[[Image:1tlf.gif|left|200px]]
[[Image:1tlf.gif|left|200px]]
-
{{Structure
+
<!--
-
|PDB= 1tlf |SIZE=350|CAPTION= <scene name='initialview01'>1tlf</scene>, resolution 2.6&Aring;
+
The line below this paragraph, containing "STRUCTURE_1tlf", creates the "Structure Box" on the page.
-
|SITE=
+
You may change the PDB parameter (which sets the PDB file loaded into the applet)
-
|LIGAND= <scene name='pdbligand=EMC:ETHYL+MERCURY+ION'>EMC</scene>, <scene name='pdbligand=IPT:ISOPROPYL-1-BETA-D-THIOGALACTOSIDE'>IPT</scene>
+
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-
|ACTIVITY=
+
or leave the SCENE parameter empty for the default display.
-
|GENE=
+
-->
-
|DOMAIN=
+
{{STRUCTURE_1tlf| PDB=1tlf | SCENE= }}
-
|RELATEDENTRY=
+
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1tlf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tlf OCA], [http://www.ebi.ac.uk/pdbsum/1tlf PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1tlf RCSB]</span>
+
-
}}
+
'''UNPRECEDENTED QUATERNARY STRUCTURE OF E. COLI LAC REPRESSOR CORE TETRAMER: IMPLICATIONS FOR DNA LOOPING'''
'''UNPRECEDENTED QUATERNARY STRUCTURE OF E. COLI LAC REPRESSOR CORE TETRAMER: IMPLICATIONS FOR DNA LOOPING'''
Line 25: Line 22:
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
[[Category: Single protein]]
[[Category: Single protein]]
-
[[Category: lac Repressor]]
+
[[Category: Lac Repressor]]
[[Category: Fischmann, T O.]]
[[Category: Fischmann, T O.]]
[[Category: Friedman, A M.]]
[[Category: Friedman, A M.]]
[[Category: Steitz, T A.]]
[[Category: Steitz, T A.]]
-
[[Category: transcription regulation]]
+
[[Category: Transcription regulation]]
-
 
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 10:05:36 2008''
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 23:57:42 2008''
+

Revision as of 07:05, 3 May 2008

Template:STRUCTURE 1tlf

UNPRECEDENTED QUATERNARY STRUCTURE OF E. COLI LAC REPRESSOR CORE TETRAMER: IMPLICATIONS FOR DNA LOOPING


Overview

The crystal structure of the tryptic core fragment of the lac repressor of Escherichia coli (LacR) complexed with the inducer isopropyl-beta-D-thiogalactoside was determined at 2.6 A resolution. The quaternary structure consists of two dyad-symmetric dimers that are nearly parallel to each other. This structure places all four DNA binding domains of intact LacR on the same side of the tetramer, and results in a deep, V-shaped cleft between the two dimers. Each monomer contributes a carboxyl-terminal helix to an antiparallel four-helix bundle that functions as a tetramerization domain. Some of the side chains whose mutation reduce DNA binding form clusters on a surface near the amino terminus. Placing the structure of the DNA binding domain complexed with operator previously determined by nuclear magnetic resonance onto this surface results in two operators being adjacent and nearly parallel to each other. Structural considerations suggest that the two dimers of LacR may flexibly alter their relative orientation in order to bind to the known varied spacings between two operators.

About this Structure

1TLF is a Single protein structure of sequence from Escherichia coli. The following page contains interesting information on the relation of 1TLF with [lac Repressor]. Full crystallographic information is available from OCA.

Reference

Crystal structure of lac repressor core tetramer and its implications for DNA looping., Friedman AM, Fischmann TO, Steitz TA, Science. 1995 Jun 23;268(5218):1721-7. PMID:7792597 Page seeded by OCA on Sat May 3 10:05:36 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools