7enc
From Proteopedia
(Difference between revisions)
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- | ==== | + | ==TFIID-based PIC-Mediator holo-complex in fully-assembled state (hPIC-MED)== |
- | <StructureSection load='7enc' size='340' side='right'caption='[[7enc]]' scene=''> | + | <StructureSection load='7enc' size='340' side='right'caption='[[7enc]], [[Resolution|resolution]] 4.13Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol= FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7enc]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7ENC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7ENC FirstGlance]. <br> |
- | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7enc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7enc OCA], [https://pdbe.org/7enc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7enc RCSB], [https://www.ebi.ac.uk/pdbsum/7enc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7enc ProSAT]</span></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 4.13Å</td></tr> |
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7enc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7enc OCA], [https://pdbe.org/7enc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7enc RCSB], [https://www.ebi.ac.uk/pdbsum/7enc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7enc ProSAT]</span></td></tr> | ||
</table> | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | The 1.3-megadalton transcription factor IID (TFIID) is required for preinitiation complex (PIC) assembly and RNA polymerase II (Pol II)-mediated transcription initiation on almost all genes. The 26-subunit Mediator stimulates transcription and cyclin-dependent kinase 7 (CDK7)-mediated phosphorylation of the Pol II C-terminal domain (CTD). We determined the structures of human Mediator in the Tail module-extended (at near-atomic resolution) and Tail-bent conformations and structures of TFIID-based PIC-Mediator (76 polypeptides, ~4.1 megadaltons) in four distinct conformations. PIC-Mediator assembly induces concerted reorganization (Head-tilting and Middle-down) of Mediator and creates a Head-Middle sandwich, which stabilizes two CTD segments and brings CTD to CDK7 for phosphorylation; this suggests a CTD-gating mechanism favorable for phosphorylation. The TFIID-based PIC architecture modulates Mediator organization and TFIIH stabilization, underscoring the importance of TFIID in orchestrating PIC-Mediator assembly. | ||
+ | |||
+ | Structures of the human Mediator and Mediator-bound preinitiation complex.,Chen X, Yin X, Li J, Wu Z, Qi Y, Wang X, Liu W, Xu Y Science. 2021 Jun 4;372(6546):eabg0635. doi: 10.1126/science.abg0635. Epub 2021 , May 6. PMID:33958484<ref>PMID:33958484</ref> | ||
+ | |||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 7enc" style="background-color:#fffaf0;"></div> | ||
+ | |||
+ | ==See Also== | ||
+ | *[[Mediator|Mediator]] | ||
+ | *[[Transcription initiation factors 3D structures|Transcription initiation factors 3D structures]] | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
+ | [[Category: Homo sapiens]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Z | + | [[Category: Chen X]] |
+ | [[Category: Li J]] | ||
+ | [[Category: Liu W]] | ||
+ | [[Category: Qi Y]] | ||
+ | [[Category: Wang X]] | ||
+ | [[Category: Wu Z]] | ||
+ | [[Category: Xu Y]] | ||
+ | [[Category: Yin X]] |
Current revision
TFIID-based PIC-Mediator holo-complex in fully-assembled state (hPIC-MED)
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Categories: Homo sapiens | Large Structures | Chen X | Li J | Liu W | Qi Y | Wang X | Wu Z | Xu Y | Yin X