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| | ==RitR mutant - C128S== | | ==RitR mutant - C128S== |
| - | <StructureSection load='5u8k' size='340' side='right' caption='[[5u8k]], [[Resolution|resolution]] 1.69Å' scene=''> | + | <StructureSection load='5u8k' size='340' side='right'caption='[[5u8k]], [[Resolution|resolution]] 1.69Å' scene=''> |
| | == Structural highlights == | | == Structural highlights == |
| - | <table><tr><td colspan='2'>[[5u8k]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Strpi Strpi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5U8K OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5U8K FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[5u8k]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pneumoniae_Hungary19A-6 Streptococcus pneumoniae Hungary19A-6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5U8K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5U8K FirstGlance]. <br> |
| - | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.69Å</td></tr> |
| - | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5u8m|5u8m]]</td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SPH_0483 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=487214 STRPI])</td></tr>
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5u8k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5u8k OCA], [https://pdbe.org/5u8k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5u8k RCSB], [https://www.ebi.ac.uk/pdbsum/5u8k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5u8k ProSAT]</span></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5u8k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5u8k OCA], [http://pdbe.org/5u8k PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5u8k RCSB], [http://www.ebi.ac.uk/pdbsum/5u8k PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5u8k ProSAT]</span></td></tr> | + | |
| | </table> | | </table> |
| | + | == Function == |
| | + | [https://www.uniprot.org/uniprot/B1I9H6_STRPI B1I9H6_STRPI] |
| | <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| | == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| | ==See Also== | | ==See Also== |
| - | *[[Response regulator|Response regulator]] | + | *[[Response regulator 3D structure|Response regulator 3D structure]] |
| | == References == | | == References == |
| | <references/> | | <references/> |
| | __TOC__ | | __TOC__ |
| | </StructureSection> | | </StructureSection> |
| - | [[Category: Strpi]] | + | [[Category: Large Structures]] |
| - | [[Category: Han, L]] | + | [[Category: Streptococcus pneumoniae Hungary19A-6]] |
| - | [[Category: Silvaggi, N R]]
| + | [[Category: Han L]] |
| - | [[Category: Aspartate-less receiver domain protein]]
| + | [[Category: Silvaggi NR]] |
| - | [[Category: Monomer]] | + | |
| - | [[Category: Repressor of iron transporter]] | + | |
| - | [[Category: Transcription]]
| + | |
| - | [[Category: Transcription regulator]]
| + | |
| Structural highlights
Function
B1I9H6_STRPI
Publication Abstract from PubMed
To survive diverse host environments, the human pathogen Streptococcus pneumoniae must prevent its self-produced, extremely high levels of peroxide from reacting with intracellular iron. However, the regulatory mechanism(s) by which the pneumococcus accomplishes this balance remains largely enigmatic, as this pathogen and other related streptococci lack all known redox-sensing transcription factors. Here we describe a two-component-derived response regulator, RitR, as the archetype for a novel family of redox sensors in a subset of streptococcal species. We show that RitR works to both repress iron transport and enable nasopharyngeal colonization through a mechanism that exploits a single cysteine (Cys128) redox switch located within its linker domain. Biochemical experiments and phylogenetics reveal that RitR has diverged from the canonical two-component virulence regulator CovR to instead dimerize and bind DNA only upon Cys128 oxidation in air-rich environments. Atomic structures show that Cys128 oxidation initiates a "helical unravelling" of the RitR linker region, suggesting a mechanism by which the DNA-binding domain is then released to interact with its cognate regulatory DNA. Expanded computational studies indicate this mechanism could be shared by many microbial species outside the streptococcus genus.
RitR is an archetype for a novel family of redox sensors in the streptococci that has evolved from two-component response regulators and is required for pneumococcal colonization.,Glanville DG, Han L, Maule AF, Woodacre A, Thanki D, Abdullah IT, Morrissey JA, Clarke TB, Yesilkaya H, Silvaggi NR, Ulijasz AT PLoS Pathog. 2018 May 11;14(5):e1007052. doi: 10.1371/journal.ppat.1007052., eCollection 2018 May. PMID:29750817[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
See Also
References
- ↑ Glanville DG, Han L, Maule AF, Woodacre A, Thanki D, Abdullah IT, Morrissey JA, Clarke TB, Yesilkaya H, Silvaggi NR, Ulijasz AT. RitR is an archetype for a novel family of redox sensors in the streptococci that has evolved from two-component response regulators and is required for pneumococcal colonization. PLoS Pathog. 2018 May 11;14(5):e1007052. doi: 10.1371/journal.ppat.1007052., eCollection 2018 May. PMID:29750817 doi:http://dx.doi.org/10.1371/journal.ppat.1007052
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