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| <StructureSection load='5v3s' size='340' side='right'caption='[[5v3s]], [[Resolution|resolution]] 1.80Å' scene=''> | | <StructureSection load='5v3s' size='340' side='right'caption='[[5v3s]], [[Resolution|resolution]] 1.80Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[5v3s]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5V3S OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5V3S FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[5v3s]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Alcaligenes_faecalis Alcaligenes faecalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5V3S OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5V3S FirstGlance]. <br> |
- | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5v3s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5v3s OCA], [http://pdbe.org/5v3s PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5v3s RCSB], [http://www.ebi.ac.uk/pdbsum/5v3s PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5v3s ProSAT]</span></td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5v3s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5v3s OCA], [https://pdbe.org/5v3s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5v3s RCSB], [https://www.ebi.ac.uk/pdbsum/5v3s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5v3s ProSAT]</span></td></tr> |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/A0A0U4HUZ5_ALCFA A0A0U4HUZ5_ALCFA] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
| + | [[Category: Alcaligenes faecalis]] |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Altier, D]] | + | [[Category: Altier D]] |
- | [[Category: Guan, R]] | + | [[Category: Guan R]] |
- | [[Category: Montelione, G]] | + | [[Category: Montelione G]] |
- | [[Category: Yalpani, N]] | + | [[Category: Yalpani N]] |
- | [[Category: Aegerolysin]]
| + | |
- | [[Category: Insecticidal toxin]]
| + | |
- | [[Category: Toxin]]
| + | |
| Structural highlights
Function
A0A0U4HUZ5_ALCFA
Publication Abstract from PubMed
Crops expressing Bacillus thuringiensis (Bt)-derived insecticidal protein genes have been commercially available for over 15 years and are providing significant value to growers. However, there remains the need for alternative insecticidal actives due to emerging insect resistance to certain Bt proteins. A screen of bacterial strains led to the discovery of a two-component insecticidal protein named AfIP-1A/1B from an Alcaligenes faecalis strain. This protein shows selectivity against coleopteran insects including western corn rootworm (WCR). Transgenic maize plants expressing AfIP-1A/1B demonstrate strong protection from rootworm injury. Surprisingly, although little sequence similarity exists to known insecticidal proteins, efficacy tests using WCR populations resistant to two different Cry proteins show that AfIP-1A/1B and mCry3A differ in their mode of action while AfIP-1A/1B and the binary Cry34Ab1/Cry35Ab1 protein share a similar mode. These findings are supported by results of competitive binding assays and the similarity of the x-ray structure of AfIP-1A to Cry34Ab1. Our work indicates that insecticidal proteins obtained from a non-Bt bacterial source can be useful for developing genetically modified crops and can function similarly to familiar proteins from Bt.
An Alcaligenes strain emulates Bacillus thuringiensis producing a binary protein that kills corn rootworm through a mechanism similar to Cry34Ab1/Cry35Ab1.,Yalpani N, Altier D, Barry J, Kassa A, Nowatzki TM, Sethi A, Zhao JZ, Diehn S, Crane V, Sandahl G, Guan R, Poland B, Perez Ortega C, Nelson ME, Xie W, Liu L, Wu G Sci Rep. 2017 Jun 8;7(1):3063. doi: 10.1038/s41598-017-03544-9. PMID:28596570[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Yalpani N, Altier D, Barry J, Kassa A, Nowatzki TM, Sethi A, Zhao JZ, Diehn S, Crane V, Sandahl G, Guan R, Poland B, Perez Ortega C, Nelson ME, Xie W, Liu L, Wu G. An Alcaligenes strain emulates Bacillus thuringiensis producing a binary protein that kills corn rootworm through a mechanism similar to Cry34Ab1/Cry35Ab1. Sci Rep. 2017 Jun 8;7(1):3063. doi: 10.1038/s41598-017-03544-9. PMID:28596570 doi:http://dx.doi.org/10.1038/s41598-017-03544-9
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