6pnj

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:20, 23 October 2024) (edit) (undo)
 
Line 1: Line 1:
==Structure of Photosystem I Acclimated to Far-red Light==
==Structure of Photosystem I Acclimated to Far-red Light==
-
<SX load='6pnj' size='340' side='right' viewer='molstar' caption='[[6pnj]], [[Resolution|resolution]] 3.20&Aring;' scene=''>
+
<SX load='6pnj' size='340' side='right' viewer='molstar' caption='[[6pnj]], [[Resolution|resolution]] 3.19&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6pnj]] is a 36 chain structure with sequence from [http://en.wikipedia.org/wiki/Fischerella_thermalis_pcc_7521 Fischerella thermalis pcc 7521]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6PNJ OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6PNJ FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6pnj]] is a 30 chain structure with sequence from [https://en.wikipedia.org/wiki/Fischerella_thermalis_PCC_7521 Fischerella thermalis PCC 7521]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6PNJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6PNJ FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BCR:BETA-CAROTENE'>BCR</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL0:CHLOROPHYLL+A+ISOMER'>CL0</scene>, <scene name='pdbligand=CLA:CHLOROPHYLL+A'>CLA</scene>, <scene name='pdbligand=F6C:Chlorophyll+F'>F6C</scene>, <scene name='pdbligand=LHG:1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE'>LHG</scene>, <scene name='pdbligand=LMG:1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE'>LMG</scene>, <scene name='pdbligand=LMT:DODECYL-BETA-D-MALTOSIDE'>LMT</scene>, <scene name='pdbligand=PQN:PHYLLOQUINONE'>PQN</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.19&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=UNK:UNKNOWN'>UNK</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BCR:BETA-CAROTENE'>BCR</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CLA:CHLOROPHYLL+A'>CLA</scene>, <scene name='pdbligand=F6C:[methyl+9-ethenyl-14-ethyl-8-formyl-4,13,18-trimethyl-20-oxo-3-{3-oxo-3-[(3,7,11,15-tetramethylhexadec-2-en-1-yl)oxy]propyl}-3,4,23,25-tetradehydro-24,26-dihydrophorbine-21-carboxylatato(2-)-kappa~4~N~23~,N~24~,N~25~,N~26~]magnesium'>F6C</scene>, <scene name='pdbligand=LHG:1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE'>LHG</scene>, <scene name='pdbligand=LMG:1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE'>LMG</scene>, <scene name='pdbligand=LMT:DODECYL-BETA-D-MALTOSIDE'>LMT</scene>, <scene name='pdbligand=PQN:PHYLLOQUINONE'>PQN</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Photosystem_I Photosystem I], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.97.1.12 1.97.1.12] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6pnj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6pnj OCA], [https://pdbe.org/6pnj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6pnj RCSB], [https://www.ebi.ac.uk/pdbsum/6pnj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6pnj ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6pnj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6pnj OCA], [http://pdbe.org/6pnj PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6pnj RCSB], [http://www.ebi.ac.uk/pdbsum/6pnj PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6pnj ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/G6FW50_9CYAN G6FW50_9CYAN]] Apoprotein for the two 4Fe-4S centers FA and FB of photosystem I (PSI); essential for photochemical activity. FB is the terminal electron acceptor of PSI, donating electrons to ferredoxin. The C-terminus interacts with PsaA/B/D and helps assemble the protein into the PSI complex. Required for binding of PsaD and PsaE to PSI. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn.[HAMAP-Rule:MF_01303] [[http://www.uniprot.org/uniprot/A0A2N6KXB6_9CYAN A0A2N6KXB6_9CYAN]] PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin or cytochrome c6.[HAMAP-Rule:MF_00482] PsaA and psaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX.[RuleBase:RU003775] [[http://www.uniprot.org/uniprot/G6FME9_9CYAN G6FME9_9CYAN]] PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin or cytochrome c6.[HAMAP-Rule:MF_00458] PsaA and psaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX.[RuleBase:RU003775] [[http://www.uniprot.org/uniprot/G6FQU3_9CYAN G6FQU3_9CYAN]] Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase.[HAMAP-Rule:MF_00613]
+
[https://www.uniprot.org/uniprot/G6FME9_9CYAN G6FME9_9CYAN] PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin or cytochrome c6.[HAMAP-Rule:MF_00458] PsaA and psaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX.[RuleBase:RU003775]
 +
 
 +
==See Also==
 +
*[[Photosystem I 3D structures|Photosystem I 3D structures]]
__TOC__
__TOC__
</SX>
</SX>
-
[[Category: Fischerella thermalis pcc 7521]]
+
[[Category: Fischerella thermalis PCC 7521]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Photosystem I]]
+
[[Category: Bryant DA]]
-
[[Category: Bryant, D A]]
+
[[Category: Fromme P]]
-
[[Category: Fromme, P]]
+
[[Category: Gisriel CJ]]
-
[[Category: Gisriel, C J]]
+
[[Category: Golbeck JH]]
-
[[Category: Golbeck, J H]]
+
[[Category: Ho M]]
-
[[Category: Ho, M]]
+
[[Category: Kurashov V]]
-
[[Category: Kurashov, V]]
+
[[Category: Shen G]]
-
[[Category: Shen, G]]
+
[[Category: Williams D]]
-
[[Category: Williams, D]]
+
[[Category: Zhang S]]
-
[[Category: Zhang, S]]
+
-
[[Category: Photosynthesis]]
+
-
[[Category: Trimeric alpha helical complex]]
+

Current revision

Structure of Photosystem I Acclimated to Far-red Light

6pnj, resolution 3.19Å

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools