7oc6
From Proteopedia
(Difference between revisions)
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<StructureSection load='7oc6' size='340' side='right'caption='[[7oc6]], [[Resolution|resolution]] 2.01Å' scene=''> | <StructureSection load='7oc6' size='340' side='right'caption='[[7oc6]], [[Resolution|resolution]] 2.01Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'> | + | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7OC6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7OC6 FirstGlance]. <br> |
- | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.01Å</td></tr> |
- | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> |
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7oc6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7oc6 OCA], [https://pdbe.org/7oc6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7oc6 RCSB], [https://www.ebi.ac.uk/pdbsum/7oc6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7oc6 ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7oc6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7oc6 OCA], [https://pdbe.org/7oc6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7oc6 RCSB], [https://www.ebi.ac.uk/pdbsum/7oc6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7oc6 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
- | == Function == | ||
- | [[https://www.uniprot.org/uniprot/ASR6_SARSH ASR6_SARSH]] Alpha-humulene synthase; part of the gene cluster that mediates the biosynthesis of xenovulene A, an unusual meroterpenoid that has potent inhibitory effects on the human gamma-aminobutyrate A (GABAA) benzodiazepine receptor (PubMed:29773797). The first step of xenovulene A biosynthesis is the biosynthesis of 3-methylorcinaldehyde performed by the non-reducing polyketide synthase aspks1 (PubMed:17912413, PubMed:29773797, PubMed:20552126). The salicylate hydroxylase asL1 then catalyzes the oxidative dearomatization of 3-methylorcinaldehyde to yield a dearomatized hydroxycyclohexadione (PubMed:29773797). The 2-oxoglutarate-dependent dioxygenase asL3 further catalyzes the oxidative ring expansion to provide the first tropolone metabolite (PubMed:29773797). The cytochrome P450 monooxygenase asR2 allows the synthesis of tropolone hemiacetal (PubMed:29773797). In parallel, a previously unrecognised class of terpene cyclase, asR6, produces alpha-humulene from farnesylpyrophosphate (FPP) (PubMed:29773797). The putative Diels-Alderase asR5 probably catalyzes the formation of the tropolone-humulene skeleton by linking humulene and the polyketide moiety (PubMed:29773797). Oxidative-ring contractions catalyzed by asL4 and asL6 then processively remove carbon atoms from the polyketide to yield xenovulene A (PubMed:29773797).<ref>PMID:17912413</ref> <ref>PMID:20552126</ref> <ref>PMID:29773797</ref> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: Alpha-humulene synthase]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Blankenfeldt | + | [[Category: Blankenfeldt W]] |
- | [[Category: Cox | + | [[Category: Cox RJ]] |
- | [[Category: Deuschmann | + | [[Category: Deuschmann A]] |
- | [[Category: Lukat | + | [[Category: Lukat P]] |
- | [[Category: Schotte | + | [[Category: Schotte C]] |
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Current revision
Selenomethionine derivative of alpha-humulene synthase AsR6 from Sarocladium schorii
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