7u13
From Proteopedia
(Difference between revisions)
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<StructureSection load='7u13' size='340' side='right'caption='[[7u13]], [[Resolution|resolution]] 2.90Å' scene=''> | <StructureSection load='7u13' size='340' side='right'caption='[[7u13]], [[Resolution|resolution]] 2.90Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'> | + | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7U13 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7U13 FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 2.9Å</td></tr> |
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7u13 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7u13 OCA], [https://pdbe.org/7u13 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7u13 RCSB], [https://www.ebi.ac.uk/pdbsum/7u13 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7u13 ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7u13 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7u13 OCA], [https://pdbe.org/7u13 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7u13 RCSB], [https://www.ebi.ac.uk/pdbsum/7u13 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7u13 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
- | == Disease == | ||
- | [[https://www.uniprot.org/uniprot/T106B_HUMAN T106B_HUMAN]] Progressive non-fluent aphasia;Semantic dementia;Behavioral variant of frontotemporal dementia. The gene represented in this entry acts as a disease modifier. Risk alleles confer genetic susceptibility by increasing gene expression (PubMed:20154673, PubMed:21178100). Increased expression may be the result of down-regulation of microRNA miR-132 and miR-212, that repress TMEM106B expression (PubMed:22895706). Thr-185 is a risk allele associated with lower GRN protein levels and early age at onset in GRN UP-FTD mutation carriers: it presents slower protein degradation that leads to higher steady-state TMEM106B levels, leading to alterations in the intracellular versus extracellular partitioning of GRN (PubMed:23742080).<ref>PMID:20154673</ref> <ref>PMID:21178100</ref> <ref>PMID:22895706</ref> <ref>PMID:23742080</ref> The gene represented in this entry acts as a disease modifier. The disease may be caused by variants affecting the gene represented in this entry. | ||
- | == Function == | ||
- | [[https://www.uniprot.org/uniprot/T106B_HUMAN T106B_HUMAN]] Involved in dendrite morphogenesis and maintenance by regulating lysosomal trafficking via its interaction with MAP6. May act by inhibiting retrograde transport of lysosomes along dendrites. Required for dendrite branching.<ref>PMID:23136129</ref> <ref>PMID:24357581</ref> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Arakhamia | + | [[Category: Arakhamia T]] |
- | [[Category: Carlomagno | + | [[Category: Carlomagno Y]] |
- | [[Category: Chang | + | [[Category: Chang A]] |
- | [[Category: Cook | + | [[Category: Cook CN]] |
- | [[Category: DeMarco | + | [[Category: DeMarco ML]] |
- | [[Category: DeTure | + | [[Category: DeTure M]] |
- | [[Category: Dhingra | + | [[Category: Dhingra S]] |
- | [[Category: Dickson | + | [[Category: Dickson D]] |
- | [[Category: Fitzpatrick | + | [[Category: Fitzpatrick AWP]] |
- | [[Category: Forgrave | + | [[Category: Forgrave LM]] |
- | [[Category: Heeman | + | [[Category: Heeman B]] |
- | [[Category: Lee | + | [[Category: Lee C]] |
- | [[Category: Mackenzie | + | [[Category: Mackenzie IRA]] |
- | [[Category: Perneel | + | [[Category: Perneel J]] |
- | [[Category: Petrucelli | + | [[Category: Petrucelli L]] |
- | [[Category: Rademakers | + | [[Category: Rademakers R]] |
- | [[Category: Simjanoska | + | [[Category: Simjanoska M]] |
- | [[Category: Stowell | + | [[Category: Stowell MHB]] |
- | [[Category: Thierry | + | [[Category: Thierry M]] |
- | [[Category: Wang | + | [[Category: Wang C]] |
- | [[Category: Wang | + | [[Category: Wang J]] |
- | [[Category: Xiang | + | [[Category: Xiang X]] |
- | [[Category: Zhang | + | [[Category: Zhang G]] |
- | + | ||
- | + | ||
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Revision as of 11:35, 23 October 2024
TMEM106B(120-254) singlet amyloid fibril from frontotemporal lobar degeneration with TDP-43 pathology (FTLD-TDP) type A (case 4)
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Categories: Large Structures | Arakhamia T | Carlomagno Y | Chang A | Cook CN | DeMarco ML | DeTure M | Dhingra S | Dickson D | Fitzpatrick AWP | Forgrave LM | Heeman B | Lee C | Mackenzie IRA | Perneel J | Petrucelli L | Rademakers R | Simjanoska M | Stowell MHB | Thierry M | Wang C | Wang J | Xiang X | Zhang G