Sandbox new animation test
From Proteopedia
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</jmol>   | </jmol>   | ||
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| + | ==  new try ==  | ||
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| + | <StructureSection load='1stp' size='340' side='right' caption='Caption for this structure' scene=''>  | ||
| + | This is a default text for your page '''Sandbox new animation test'''. Click above on '''edit this page''' to modify. Be careful with the < and > signs.  | ||
| + | You may include any references to papers as in: the use of JSmol in Proteopedia <ref>DOI 10.1002/ijch.201300024</ref> or to the article describing Jmol <ref>PMID:21638687</ref> to the rescue.  | ||
| + | |||
| + | == Function ==  | ||
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| + | Superposition of the monomer of TLR2<sup>TIR</sup> induced MyD88<sup>TIR</sup> structure [[8s78]] (blue) with the MyD88<sup>TIR</sup> X-ray structure [[4e07]] yellow) <jmol>  | ||
| + |   <jmolButton>  | ||
| + |     <text>Superposition</text>  | ||
| + |     <script>  | ||
| + |       script /wiki/scripts/10/1056692/Fig_07c_01/5.spt; delay .1; script /wiki/scripts/10/1056692/Fig_07c_01/5.spt;  | ||
| + |     </script>  | ||
| + |   </jmolButton>  | ||
| + | </jmol>   <jmol>  | ||
| + | <jmolButton>  | ||
| + |   <text>Animation</text>  | ||
| + |   <script>  | ||
| + |     var a = [1];  | ||
| + |     for(var i IN a) {  | ||
| + |       script /wiki/scripts/10/1056692/Fig_07c_animate/5.spt; delay .5;  | ||
| + |     }  | ||
| + |   </script>  | ||
| + | </jmolButton>  | ||
| + | </jmol>  | ||
| + | |||
| + | |||
| + | Superpostion of the  monomer of TLR2<sup>TIR</sup> induced MyD88<sup>TIR</sup> structure [[8s78]] (blue) on the MyD88<sup>TIR</sup> NMR structure [[2z5v]] orange) <jmol>  | ||
| + |   <jmolButton>  | ||
| + |     <text>Superposition</text>  | ||
| + |     <script>  | ||
| + |       script /wiki/scripts/10/1056692/Fig_7d_superposition/3.spt; delay .1; script /wiki/scripts/10/1056692/Fig_7d_superposition/3.spt;  | ||
| + |     </script>  | ||
| + |   </jmolButton>  | ||
| + | </jmol>   <jmol>  | ||
| + | <jmolButton>  | ||
| + |   <text>Animation</text>  | ||
| + |   <script>  | ||
| + |     var a = [1];  | ||
| + |     for(var i IN a) {  | ||
| + |       script /wiki/scripts/10/1056692/Fig_7d_animation/1.spt; delay .5;  | ||
| + |     }  | ||
| + |   </script>  | ||
| + | </jmolButton>  | ||
| + | </jmol>   | ||
Revision as of 06:57, 24 October 2024
Your Heading Here (maybe something like 'Structure')
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References
- ↑ Hanson, R. M., Prilusky, J., Renjian, Z., Nakane, T. and Sussman, J. L. (2013), JSmol and the Next-Generation Web-Based Representation of 3D Molecular Structure as Applied to Proteopedia. Isr. J. Chem., 53:207-216. doi:http://dx.doi.org/10.1002/ijch.201300024
 - ↑ Herraez A. Biomolecules in the computer: Jmol to the rescue. Biochem Mol Biol Educ. 2006 Jul;34(4):255-61. doi: 10.1002/bmb.2006.494034042644. PMID:21638687 doi:10.1002/bmb.2006.494034042644
 - ↑ Hanson, R. M., Prilusky, J., Renjian, Z., Nakane, T. and Sussman, J. L. (2013), JSmol and the Next-Generation Web-Based Representation of 3D Molecular Structure as Applied to Proteopedia. Isr. J. Chem., 53:207-216. doi:http://dx.doi.org/10.1002/ijch.201300024
 - ↑ Herraez A. Biomolecules in the computer: Jmol to the rescue. Biochem Mol Biol Educ. 2006 Jul;34(4):255-61. doi: 10.1002/bmb.2006.494034042644. PMID:21638687 doi:10.1002/bmb.2006.494034042644
 
