2ra2

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:37, 30 October 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='2ra2' size='340' side='right'caption='[[2ra2]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
<StructureSection load='2ra2' size='340' side='right'caption='[[2ra2]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2ra2]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Salty Salty]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RA2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RA2 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2ra2]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RA2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RA2 FirstGlance]. <br>
-
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2jn0|2jn0]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ygdI, STM2983 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=99287 SALTY])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ra2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ra2 OCA], [https://pdbe.org/2ra2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ra2 RCSB], [https://www.ebi.ac.uk/pdbsum/2ra2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ra2 ProSAT], [https://www.topsan.org/Proteins/NESGC/2ra2 TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ra2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ra2 OCA], [https://pdbe.org/2ra2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ra2 RCSB], [https://www.ebi.ac.uk/pdbsum/2ra2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ra2 ProSAT], [https://www.topsan.org/Proteins/NESGC/2ra2 TOPSAN]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q7CPV8_SALTY Q7CPV8_SALTY]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 14: Line 15:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ra/2ra2_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ra/2ra2_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 22: Line 23:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Salty]]
+
[[Category: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]]
-
[[Category: Acton, T B]]
+
[[Category: Acton TB]]
-
[[Category: Baran, M C]]
+
[[Category: Baran MC]]
-
[[Category: Cunningham, K]]
+
[[Category: Cunningham K]]
-
[[Category: Hunt, J F]]
+
[[Category: Hunt JF]]
-
[[Category: Kuzin, A P]]
+
[[Category: Kuzin AP]]
-
[[Category: Liu, J]]
+
[[Category: Liu J]]
-
[[Category: Mao, L]]
+
[[Category: Mao L]]
-
[[Category: Montelione, G T]]
+
[[Category: Montelione GT]]
-
[[Category: Structural genomic]]
+
[[Category: Rost B]]
-
[[Category: Rost, B]]
+
[[Category: Seetharaman J]]
-
[[Category: Seetharaman, J]]
+
[[Category: Su M]]
-
[[Category: Su, M]]
+
[[Category: Tong L]]
-
[[Category: Tong, L]]
+
[[Category: Vorobiev SM]]
-
[[Category: Vorobiev, S M]]
+
[[Category: Wang H]]
-
[[Category: Wang, H]]
+
[[Category: Xiao R]]
-
[[Category: Xiao, R]]
+
-
[[Category: Lipoprotein]]
+
-
[[Category: Nesg]]
+
-
[[Category: PSI, Protein structure initiative]]
+
-
[[Category: Q7cpv8]]
+
-
[[Category: Str88a]]
+
-
[[Category: Unknown function]]
+

Current revision

X-Ray structure of the Q7CPV8 protein from Salmonella typhimurium at the resolution 1.9 A. Northeast Structural Genomics Consortium target StR88A

PDB ID 2ra2

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools