3gas

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Current revision (09:11, 30 October 2024) (edit) (undo)
 
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<StructureSection load='3gas' size='340' side='right'caption='[[3gas]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
<StructureSection load='3gas' size='340' side='right'caption='[[3gas]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3gas]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Helicobacter_pylori_nctc_11639 Helicobacter pylori nctc 11639]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GAS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GAS FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3gas]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Helicobacter_pylori_NCTC_11639 Helicobacter pylori NCTC 11639]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GAS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GAS FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AZI:AZIDE+ION'>AZI</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AZI:AZIDE+ION'>AZI</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">HugZ ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=637383 Helicobacter pylori NCTC 11639])</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Heme_oxygenase Heme oxygenase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.14.99.3 1.14.99.3] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gas FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gas OCA], [https://pdbe.org/3gas PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gas RCSB], [https://www.ebi.ac.uk/pdbsum/3gas PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gas ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gas FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gas OCA], [https://pdbe.org/3gas PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gas RCSB], [https://www.ebi.ac.uk/pdbsum/3gas PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gas ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/C0LU01_HELPX C0LU01_HELPX]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ga/3gas_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ga/3gas_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Helicobacter pylori nctc 11639]]
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[[Category: Helicobacter pylori NCTC 11639]]
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[[Category: Heme oxygenase]]
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[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Guo, G]]
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[[Category: Guo G]]
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[[Category: Guo, Y]]
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[[Category: Guo Y]]
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[[Category: Hu, Y L]]
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[[Category: Hu YL]]
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[[Category: Jiang, F]]
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[[Category: Jiang F]]
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[[Category: Wang, D C]]
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[[Category: Wang DC]]
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[[Category: Zou, Q M]]
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[[Category: Zou QM]]
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[[Category: Fmn-binding split barrel]]
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[[Category: Oxidoreductase]]
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Current revision

Crystal Structure of Helicobacter pylori Heme Oxygenase Hugz in Complex with Heme

PDB ID 3gas

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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