3hh1

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:14, 30 October 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='3hh1' size='340' side='right'caption='[[3hh1]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
<StructureSection load='3hh1' size='340' side='right'caption='[[3hh1]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3hh1]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_49652 Atcc 49652]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HH1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HH1 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3hh1]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Chlorobaculum_tepidum Chlorobaculum tepidum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HH1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HH1 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CT1646 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1097 ATCC 49652])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hh1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hh1 OCA], [https://pdbe.org/3hh1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hh1 RCSB], [https://www.ebi.ac.uk/pdbsum/3hh1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hh1 ProSAT], [https://www.topsan.org/Proteins/MCSG/3hh1 TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hh1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hh1 OCA], [https://pdbe.org/3hh1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hh1 RCSB], [https://www.ebi.ac.uk/pdbsum/3hh1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hh1 ProSAT], [https://www.topsan.org/Proteins/MCSG/3hh1 TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/Q8KBY6_CHLTE Q8KBY6_CHLTE]] Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.[HAMAP-Rule:MF_01877]
+
[https://www.uniprot.org/uniprot/Q8KBY6_CHLTE Q8KBY6_CHLTE] Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.[HAMAP-Rule:MF_01877]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 16: Line 15:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hh/3hh1_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hh/3hh1_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 23: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Atcc 49652]]
+
[[Category: Chlorobaculum tepidum]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Clancy, S]]
+
[[Category: Clancy S]]
-
[[Category: Cuff, M E]]
+
[[Category: Cuff ME]]
-
[[Category: Joachimiak, A]]
+
[[Category: Joachimiak A]]
-
[[Category: Structural genomic]]
+
[[Category: Sather A]]
-
[[Category: Sather, A]]
+
-
[[Category: Chlorobium tepidum]]
+
-
[[Category: Mcsg]]
+
-
[[Category: Methyltransferase]]
+
-
[[Category: PSI, Protein structure initiative]]
+
-
[[Category: Tetrapyrrole methylase]]
+
-
[[Category: Transferase]]
+

Current revision

The Structure of a Tetrapyrrole methylase family protein domain from Chlorobium tepidum TLS

PDB ID 3hh1

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools