3lhk

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:23, 30 October 2024) (edit) (undo)
 
Line 1: Line 1:
==Crystal structure of putative DNA binding protein from Methanocaldococcus jannaschii.==
==Crystal structure of putative DNA binding protein from Methanocaldococcus jannaschii.==
-
<StructureSection load='3lhk' size='340' side='right' caption='[[3lhk]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
+
<StructureSection load='3lhk' size='340' side='right'caption='[[3lhk]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3lhk]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Metja Metja]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LHK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3LHK FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3lhk]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii_DSM_2661 Methanocaldococcus jannaschii DSM 2661]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LHK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LHK FirstGlance]. <br>
-
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">MJ0014 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=243232 METJA])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3lhk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lhk OCA], [http://pdbe.org/3lhk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3lhk RCSB], [http://www.ebi.ac.uk/pdbsum/3lhk PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3lhk ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3lhk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lhk OCA], [https://pdbe.org/3lhk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3lhk RCSB], [https://www.ebi.ac.uk/pdbsum/3lhk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3lhk ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Y014_METJA Y014_METJA]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lh/3lhk_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lh/3lhk_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 20: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Metja]]
+
[[Category: Large Structures]]
-
[[Category: Chang, C]]
+
[[Category: Methanocaldococcus jannaschii DSM 2661]]
-
[[Category: Chhor, G]]
+
[[Category: Chang C]]
-
[[Category: Cobb, G]]
+
[[Category: Chhor G]]
-
[[Category: Joachimiak, A]]
+
[[Category: Cobb G]]
-
[[Category: Structural genomic]]
+
[[Category: Joachimiak A]]
-
[[Category: Dna binding protein]]
+
-
[[Category: Mcsg]]
+
-
[[Category: PSI, Protein structure initiative]]
+

Current revision

Crystal structure of putative DNA binding protein from Methanocaldococcus jannaschii.

PDB ID 3lhk

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools