3lv4

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Current revision (09:24, 30 October 2024) (edit) (undo)
 
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==Crystal structure of the glycoside hydrolase, family 43 YxiA protein from Bacillus licheniformis. Northeast Structural Genomics Consortium Target BiR14.==
==Crystal structure of the glycoside hydrolase, family 43 YxiA protein from Bacillus licheniformis. Northeast Structural Genomics Consortium Target BiR14.==
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<StructureSection load='3lv4' size='340' side='right' caption='[[3lv4]], [[Resolution|resolution]] 1.69&Aring;' scene=''>
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<StructureSection load='3lv4' size='340' side='right'caption='[[3lv4]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3lv4]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacld Bacld]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LV4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3LV4 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3lv4]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_licheniformis_DSM_13_=_ATCC_14580 Bacillus licheniformis DSM 13 = ATCC 14580]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LV4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LV4 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.695&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BL00219, BLi04220, yxiA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=279010 BACLD])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3lv4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lv4 OCA], [https://pdbe.org/3lv4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3lv4 RCSB], [https://www.ebi.ac.uk/pdbsum/3lv4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3lv4 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3lv4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lv4 OCA], [http://pdbe.org/3lv4 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3lv4 RCSB], [http://www.ebi.ac.uk/pdbsum/3lv4 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3lv4 ProSAT]</span></td></tr>
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</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q65D31_BACLD Q65D31_BACLD]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lv/3lv4_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lv/3lv4_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Bacld]]
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[[Category: Bacillus licheniformis DSM 13 = ATCC 14580]]
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[[Category: Abashidze, M]]
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[[Category: Large Structures]]
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[[Category: Acton, T B]]
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[[Category: Abashidze M]]
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[[Category: Belote, R L]]
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[[Category: Acton TB]]
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[[Category: Ciccosanti, C]]
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[[Category: Belote RL]]
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[[Category: Everett, J K]]
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[[Category: Ciccosanti C]]
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[[Category: Hunt, J F]]
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[[Category: Everett JK]]
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[[Category: Montelione, G T]]
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[[Category: Hunt JF]]
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[[Category: Structural genomic]]
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[[Category: Montelione GT]]
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[[Category: Sahdev, S]]
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[[Category: Sahdev S]]
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[[Category: Seetharaman, J]]
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[[Category: Seetharaman J]]
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[[Category: Tong, L]]
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[[Category: Tong L]]
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[[Category: Vorobiev, S]]
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[[Category: Vorobiev S]]
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[[Category: Xiao, R]]
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[[Category: Xiao R]]
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[[Category: 5-alpha-l-arabinosidase]]
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[[Category: Glycoside hydrolase]]
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[[Category: Hydrolase]]
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[[Category: Nesg]]
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[[Category: PSI, Protein structure initiative]]
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[[Category: Similar to arabinan endo-1]]
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Current revision

Crystal structure of the glycoside hydrolase, family 43 YxiA protein from Bacillus licheniformis. Northeast Structural Genomics Consortium Target BiR14.

PDB ID 3lv4

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