3lyy

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Current revision (09:25, 30 October 2024) (edit) (undo)
 
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==Crystal structure of the MucBP domain of the adhesion protein PEPE_0118 from Pediococcus pentosaceus. Northeast Structural Genomics Consortium target id PtR41A==
==Crystal structure of the MucBP domain of the adhesion protein PEPE_0118 from Pediococcus pentosaceus. Northeast Structural Genomics Consortium target id PtR41A==
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<StructureSection load='3lyy' size='340' side='right' caption='[[3lyy]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
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<StructureSection load='3lyy' size='340' side='right'caption='[[3lyy]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3lyy]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pedpa Pedpa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LYY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3LYY FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3lyy]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pediococcus_pentosaceus_ATCC_25745 Pediococcus pentosaceus ATCC 25745]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LYY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LYY FirstGlance]. <br>
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</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PEPE_0118 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=278197 PEDPA])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3lyy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lyy OCA], [http://pdbe.org/3lyy PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3lyy RCSB], [http://www.ebi.ac.uk/pdbsum/3lyy PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3lyy ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3lyy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lyy OCA], [https://pdbe.org/3lyy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3lyy RCSB], [https://www.ebi.ac.uk/pdbsum/3lyy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3lyy ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q03HU7_PEDPA Q03HU7_PEDPA]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ly/3lyy_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ly/3lyy_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Pedpa]]
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[[Category: Large Structures]]
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[[Category: Acton, T B]]
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[[Category: Pediococcus pentosaceus ATCC 25745]]
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[[Category: Baran, M C]]
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[[Category: Acton TB]]
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[[Category: Cunningham, K]]
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[[Category: Baran MC]]
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[[Category: Hunt, J F]]
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[[Category: Cunningham K]]
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[[Category: Janjua, H]]
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[[Category: Hunt JF]]
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[[Category: Lew, S]]
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[[Category: Janjua H]]
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[[Category: Liu, J]]
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[[Category: Lew S]]
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[[Category: Montelione, G T]]
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[[Category: Liu J]]
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[[Category: Structural genomic]]
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[[Category: Montelione GT]]
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[[Category: Owens, L]]
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[[Category: Owens L]]
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[[Category: Seetharaman, J]]
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[[Category: Seetharaman J]]
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[[Category: Tong, L]]
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[[Category: Tong L]]
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[[Category: Wang, D]]
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[[Category: Wang D]]
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[[Category: Xiao, R]]
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[[Category: Xiao R]]
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[[Category: Cell adhesion]]
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[[Category: Cell wall]]
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[[Category: Nesg]]
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[[Category: Peptidoglycan-anchor]]
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[[Category: PSI, Protein structure initiative]]
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Current revision

Crystal structure of the MucBP domain of the adhesion protein PEPE_0118 from Pediococcus pentosaceus. Northeast Structural Genomics Consortium target id PtR41A

PDB ID 3lyy

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OCA

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