3o4m

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:29, 30 October 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='3o4m' size='340' side='right'caption='[[3o4m]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
<StructureSection load='3o4m' size='340' side='right'caption='[[3o4m]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3o4m]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3O4M OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=3O4M FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3o4m]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3O4M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3O4M FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CAQ:CATECHOL'>CAQ</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3hsw|3hsw]], [[3l30|3l30]], [[3l69|3l69]], [[2b00|2b00]], [[2b03|2b03]], [[2b04|2b04]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CAQ:CATECHOL'>CAQ</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Phospholipase_A(2) Phospholipase A(2)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.1.4 3.1.1.4] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3o4m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3o4m OCA], [https://pdbe.org/3o4m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3o4m RCSB], [https://www.ebi.ac.uk/pdbsum/3o4m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3o4m ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=3o4m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3o4m OCA], [http://pdbe.org/3o4m PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3o4m RCSB], [http://www.ebi.ac.uk/pdbsum/3o4m PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3o4m ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/PA21B_PIG PA21B_PIG]] PA2 catalyzes the calcium-dependent hydrolysis of the 2-acyl groups in 3-sn-phosphoglycerides.
+
[https://www.uniprot.org/uniprot/PA21B_PIG PA21B_PIG] PA2 catalyzes the calcium-dependent hydrolysis of the 2-acyl groups in 3-sn-phosphoglycerides.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 16: Line 15:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o4/3o4m_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o4/3o4m_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 39: Line 38:
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Sus scrofa]]
[[Category: Sus scrofa]]
-
[[Category: Dileep, K V]]
+
[[Category: Dileep KV]]
-
[[Category: Haridas, M]]
+
[[Category: Haridas M]]
-
[[Category: Karthe, P]]
+
[[Category: Karthe P]]
-
[[Category: Mandal, P K]]
+
[[Category: Mandal PK]]
-
[[Category: Sadasivan, C]]
+
[[Category: Sadasivan C]]
-
[[Category: Tintu, I]]
+
[[Category: Tintu I]]
-
[[Category: Catechol binding]]
+
-
[[Category: Disulfide bond]]
+
-
[[Category: Hydrolase-hydrolase inhibitor complex]]
+
-
[[Category: Lipid degradation]]
+
-
[[Category: Lipoprotein]]
+
-
[[Category: Metal-binding]]
+
-
[[Category: Palmitate]]
+
-
[[Category: Pancrea]]
+
-
[[Category: Pancreatic enzyme]]
+
-
[[Category: Pla2]]
+
-
[[Category: Pyrrolidone carboxylic acid]]
+

Current revision

Crystal structure of porcine pancreatic phospholipase A2 in complex with 1,2-dihydroxybenzene

PDB ID 3o4m

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3o4m"
Personal tools