3tfx

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Current revision (09:42, 30 October 2024) (edit) (undo)
 
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<StructureSection load='3tfx' size='340' side='right'caption='[[3tfx]], [[Resolution|resolution]] 2.19&Aring;' scene=''>
<StructureSection load='3tfx' size='340' side='right'caption='[[3tfx]], [[Resolution|resolution]] 2.19&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3tfx]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_acidophilus"_moro_1900 "bacillus acidophilus" moro 1900]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TFX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3TFX FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3tfx]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactobacillus_acidophilus Lactobacillus acidophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TFX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3TFX FirstGlance]. <br>
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</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.19&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">LBA1386, pyrF, pyrF/LBA1386 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1579 "Bacillus acidophilus" Moro 1900])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Orotidine-5'-phosphate_decarboxylase Orotidine-5'-phosphate decarboxylase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.23 4.1.1.23] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3tfx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3tfx OCA], [https://pdbe.org/3tfx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3tfx RCSB], [https://www.ebi.ac.uk/pdbsum/3tfx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3tfx ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3tfx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3tfx OCA], [https://pdbe.org/3tfx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3tfx RCSB], [https://www.ebi.ac.uk/pdbsum/3tfx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3tfx ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/PYRF_LACAC PYRF_LACAC]] Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP) (By similarity).
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[https://www.uniprot.org/uniprot/PYRF_LACAC PYRF_LACAC] Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP) (By similarity).
==See Also==
==See Also==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Bacillus acidophilus moro 1900]]
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[[Category: Lactobacillus acidophilus]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Orotidine-5'-phosphate decarboxylase]]
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[[Category: Almo SC]]
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[[Category: Almo, S C]]
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[[Category: Chamala S]]
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[[Category: Chamala, S]]
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[[Category: Evans B]]
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[[Category: Evans, B]]
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[[Category: Foti R]]
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[[Category: Foti, R]]
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[[Category: Gizzi A]]
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[[Category: Gizzi, A]]
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[[Category: Hillerich B]]
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[[Category: Hillerich, B]]
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[[Category: Kar A]]
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[[Category: Kar, A]]
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[[Category: LaFleur J]]
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[[Category: LaFleur, J]]
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[[Category: Satyanarayana L]]
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[[Category: Structural genomic]]
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[[Category: Seidel R]]
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[[Category: Satyanarayana, L]]
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[[Category: Swaminathan S]]
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[[Category: Seidel, R]]
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[[Category: Villigas G]]
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[[Category: Swaminathan, S]]
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[[Category: Zencheck W]]
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[[Category: Villigas, G]]
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[[Category: Zencheck, W]]
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[[Category: Decarboxylase lyase]]
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[[Category: Lyase]]
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[[Category: Nysgrc]]
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[[Category: Psi-biology]]
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[[Category: Pyrimidine metabolism]]
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[[Category: Tim barrel fold]]
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[[Category: Ump biosynthesis via de novo pathway]]
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[[Category: Ump from orotate]]
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Current revision

Crystal structure of Orotidine 5'-phosphate decarboxylase from Lactobacillus acidophilus

PDB ID 3tfx

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