3eqe

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:50, 6 November 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='3eqe' size='340' side='right'caption='[[3eqe]], [[Resolution|resolution]] 2.82&Aring;' scene=''>
<StructureSection load='3eqe' size='340' side='right'caption='[[3eqe]], [[Resolution|resolution]] 2.82&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3eqe]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_globigii"_migula_1900 "bacillus globigii" migula 1900]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EQE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EQE FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3eqe]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EQE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EQE FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.82&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BSU31140, yubC ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 "Bacillus globigii" Migula 1900])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3eqe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3eqe OCA], [https://pdbe.org/3eqe PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3eqe RCSB], [https://www.ebi.ac.uk/pdbsum/3eqe PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3eqe ProSAT], [https://www.topsan.org/Proteins/NESGC/3eqe TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3eqe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3eqe OCA], [https://pdbe.org/3eqe PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3eqe RCSB], [https://www.ebi.ac.uk/pdbsum/3eqe PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3eqe ProSAT], [https://www.topsan.org/Proteins/NESGC/3eqe TOPSAN]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/CDOA_BACSU CDOA_BACSU]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 14: Line 15:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/eq/3eqe_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/eq/3eqe_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 21: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bacillus globigii migula 1900]]
+
[[Category: Bacillus subtilis]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Acton, T B]]
+
[[Category: Acton TB]]
-
[[Category: Benach, J]]
+
[[Category: Benach J]]
-
[[Category: Ciccosanti, C]]
+
[[Category: Ciccosanti C]]
-
[[Category: Clayton, G]]
+
[[Category: Clayton G]]
-
[[Category: Cooper, B]]
+
[[Category: Cooper B]]
-
[[Category: Foote, E L]]
+
[[Category: Foote EL]]
-
[[Category: Forouhar, F]]
+
[[Category: Forouhar F]]
-
[[Category: Hunt, J F]]
+
[[Category: Hunt JF]]
-
[[Category: Mao, L]]
+
[[Category: Mao L]]
-
[[Category: Montelione, G T]]
+
[[Category: Montelione GT]]
-
[[Category: Structural genomic]]
+
[[Category: Seetharaman J]]
-
[[Category: Seetharaman, J]]
+
[[Category: Su M]]
-
[[Category: Su, M]]
+
[[Category: Tong L]]
-
[[Category: Tong, L]]
+
[[Category: Vorobiev SM]]
-
[[Category: Vorobiev, S M]]
+
[[Category: Wang H]]
-
[[Category: Wang, H]]
+
[[Category: Xiao R]]
-
[[Category: Xiao, R]]
+
-
[[Category: Cystein dioxygenase]]
+
-
[[Category: Nesg]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: PSI, Protein structure initiative]]
+
-
[[Category: Sr112]]
+
-
[[Category: Yubc]]
+

Current revision

Crystal structure of the YubC protein from Bacillus subtilis. Northeast Structural Genomics Consortium target SR112.

PDB ID 3eqe

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3eqe"
Personal tools