3gmt

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Current revision (09:55, 6 November 2024) (edit) (undo)
 
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<StructureSection load='3gmt' size='340' side='right'caption='[[3gmt]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
<StructureSection load='3gmt' size='340' side='right'caption='[[3gmt]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3gmt]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Burp1 Burp1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GMT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GMT FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3gmt]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Burkholderia_pseudomallei_1710b Burkholderia pseudomallei 1710b]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GMT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GMT FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">adk, BURPS1710b_1080 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=320372 BURP1])</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Adenylate_kinase Adenylate kinase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.4.3 2.7.4.3] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gmt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gmt OCA], [https://pdbe.org/3gmt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gmt RCSB], [https://www.ebi.ac.uk/pdbsum/3gmt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gmt ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gmt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gmt OCA], [https://pdbe.org/3gmt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gmt RCSB], [https://www.ebi.ac.uk/pdbsum/3gmt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gmt ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/KAD_BURP1 KAD_BURP1]] Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism (By similarity).
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[https://www.uniprot.org/uniprot/KAD_BURP1 KAD_BURP1] Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gm/3gmt_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gm/3gmt_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Adenylate kinase]]
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[[Category: Burkholderia pseudomallei 1710b]]
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[[Category: Burp1]]
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[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Abendroth, J]]
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[[Category: Abendroth J]]
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[[Category: Buchko, G W]]
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[[Category: Buchko GW]]
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[[Category: Hewitt, S N]]
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[[Category: Hewitt SN]]
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[[Category: Myler, P J]]
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[[Category: Myler PJ]]
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[[Category: Napuli, A J]]
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[[Category: Napuli AJ]]
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[[Category: Robinson, H]]
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[[Category: Robinson H]]
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[[Category: Structural genomic]]
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[[Category: Stacy R]]
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[[Category: Stacy, R]]
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[[Category: Staker BL]]
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[[Category: Staker, B L]]
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[[Category: Stewart L]]
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[[Category: Stewart, L]]
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[[Category: Van Voorhis W]]
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[[Category: Voorhis, W Van]]
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[[Category: Atp-binding]]
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[[Category: Burkholderia pseudomallei]]
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[[Category: Kinase]]
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[[Category: Nucleotide biosynthesis]]
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[[Category: Nucleotide-binding]]
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[[Category: Ssgcid]]
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[[Category: Transferase]]
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Current revision

Crystal structure of adenylate kinase from burkholderia pseudomallei

PDB ID 3gmt

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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