3nlc

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Current revision (10:14, 6 November 2024) (edit) (undo)
 
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==Crystal structure of the VP0956 protein from Vibrio parahaemolyticus. Northeast Structural Genomics Consortium Target VpR147==
==Crystal structure of the VP0956 protein from Vibrio parahaemolyticus. Northeast Structural Genomics Consortium Target VpR147==
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<StructureSection load='3nlc' size='340' side='right' caption='[[3nlc]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
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<StructureSection load='3nlc' size='340' side='right'caption='[[3nlc]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3nlc]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"oceanomonas_parahaemolytica"_(fujino_et_al._1951)_miyamoto_et_al._1961 "oceanomonas parahaemolytica" (fujino et al. 1951) miyamoto et al. 1961]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NLC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3NLC FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3nlc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_parahaemolyticus Vibrio parahaemolyticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NLC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NLC FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.15&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">VP0956 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=670 "Oceanomonas parahaemolytica" (Fujino et al. 1951) Miyamoto et al. 1961])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3nlc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nlc OCA], [https://pdbe.org/3nlc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3nlc RCSB], [https://www.ebi.ac.uk/pdbsum/3nlc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3nlc ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3nlc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nlc OCA], [http://pdbe.org/3nlc PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3nlc RCSB], [http://www.ebi.ac.uk/pdbsum/3nlc PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3nlc ProSAT]</span></td></tr>
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</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q87R42_VIBPA Q87R42_VIBPA]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nl/3nlc_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nl/3nlc_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Acton, T B]]
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[[Category: Large Structures]]
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[[Category: Hunt, J]]
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[[Category: Vibrio parahaemolyticus]]
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[[Category: Mao, L]]
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[[Category: Acton TB]]
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[[Category: Montelione, G T]]
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[[Category: Hunt J]]
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[[Category: Structural genomic]]
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[[Category: Mao L]]
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[[Category: Neely, H]]
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[[Category: Montelione GT]]
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[[Category: Seetharaman, J]]
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[[Category: Neely H]]
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[[Category: Tong, L]]
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[[Category: Seetharaman J]]
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[[Category: Vorobiev, S]]
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[[Category: Tong L]]
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[[Category: Wang, D]]
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[[Category: Vorobiev S]]
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[[Category: Xiao, R]]
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[[Category: Wang D]]
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[[Category: Fad-binding protein]]
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[[Category: Xiao R]]
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[[Category: Nesg]]
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[[Category: PSI, Protein structure initiative]]
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[[Category: Unknown function]]
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Current revision

Crystal structure of the VP0956 protein from Vibrio parahaemolyticus. Northeast Structural Genomics Consortium Target VpR147

PDB ID 3nlc

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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