3oco

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:16, 6 November 2024) (edit) (undo)
 
Line 1: Line 1:
==The crystal structure of a Hemolysin-like protein containing CBS domain of Oenococcus oeni PSU==
==The crystal structure of a Hemolysin-like protein containing CBS domain of Oenococcus oeni PSU==
-
<StructureSection load='3oco' size='340' side='right' caption='[[3oco]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
+
<StructureSection load='3oco' size='340' side='right'caption='[[3oco]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3oco]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Oenob Oenob]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OCO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3OCO FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3oco]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Oenococcus_oeni_PSU-1 Oenococcus oeni PSU-1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OCO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3OCO FirstGlance]. <br>
-
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.204&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">OEOE_0137 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=203123 OENOB])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3oco FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3oco OCA], [http://pdbe.org/3oco PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3oco RCSB], [http://www.ebi.ac.uk/pdbsum/3oco PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3oco ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3oco FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3oco OCA], [https://pdbe.org/3oco PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3oco RCSB], [https://www.ebi.ac.uk/pdbsum/3oco PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3oco ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q04HE1_OENOB Q04HE1_OENOB]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oc/3oco_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oc/3oco_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 20: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Oenob]]
+
[[Category: Large Structures]]
-
[[Category: Cobb, G]]
+
[[Category: Oenococcus oeni PSU-1]]
-
[[Category: Hatzos, C]]
+
[[Category: Cobb G]]
-
[[Category: Joachimiak, A]]
+
[[Category: Hatzos C]]
-
[[Category: Structural genomic]]
+
[[Category: Joachimiak A]]
-
[[Category: Tan, K]]
+
[[Category: Tan K]]
-
[[Category: Mcsg]]
+
-
[[Category: PSI, Protein structure initiative]]
+
-
[[Category: Unknown function]]
+

Current revision

The crystal structure of a Hemolysin-like protein containing CBS domain of Oenococcus oeni PSU

PDB ID 3oco

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools