6egs

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==Crystal structure of the GalNAc-T2 F104S mutant in complex with UDP-GalNAc==
==Crystal structure of the GalNAc-T2 F104S mutant in complex with UDP-GalNAc==
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<StructureSection load='6egs' size='340' side='right' caption='[[6egs]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
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<StructureSection load='6egs' size='340' side='right'caption='[[6egs]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6egs]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6EGS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6EGS FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6egs]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6EGS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6EGS FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=UD2:URIDINE-DIPHOSPHATE-N-ACETYLGALACTOSAMINE'>UD2</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GALNT2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=UD2:URIDINE-DIPHOSPHATE-N-ACETYLGALACTOSAMINE'>UD2</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Polypeptide_N-acetylgalactosaminyltransferase Polypeptide N-acetylgalactosaminyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.41 2.4.1.41] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6egs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6egs OCA], [https://pdbe.org/6egs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6egs RCSB], [https://www.ebi.ac.uk/pdbsum/6egs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6egs ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6egs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6egs OCA], [http://pdbe.org/6egs PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6egs RCSB], [http://www.ebi.ac.uk/pdbsum/6egs PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6egs ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/GALT2_HUMAN GALT2_HUMAN]] Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. Has a broad spectrum of substrates for peptides such as EA2, Muc5AC, Muc1a, Muc1b. Probably involved in O-linked glycosylation of the immunoglobulin A1 (IgA1) hinge region.<ref>PMID:9295285</ref> <ref>PMID:12438318</ref>
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[https://www.uniprot.org/uniprot/GALT2_HUMAN GALT2_HUMAN] Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. Has a broad spectrum of substrates for peptides such as EA2, Muc5AC, Muc1a, Muc1b. Probably involved in O-linked glycosylation of the immunoglobulin A1 (IgA1) hinge region.<ref>PMID:9295285</ref> <ref>PMID:12438318</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Human]]
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[[Category: Homo sapiens]]
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[[Category: Polypeptide N-acetylgalactosaminyltransferase]]
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[[Category: Large Structures]]
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[[Category: Bennett, E P]]
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[[Category: Bennett EP]]
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[[Category: Clausen, H]]
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[[Category: Clausen H]]
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[[Category: Coelho, H]]
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[[Category: Coelho H]]
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[[Category: Corzana, F]]
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[[Category: Corzana F]]
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[[Category: Diniz, A]]
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[[Category: Diniz A]]
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[[Category: Hurtado-Guerrero, R]]
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[[Category: Hurtado-Guerrero R]]
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[[Category: Jimenez-Barbero, J]]
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[[Category: Jimenez-Barbero J]]
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[[Category: Lira-Navarrete, E]]
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[[Category: Lira-Navarrete E]]
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[[Category: Marcelo, F]]
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[[Category: Marcelo F]]
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[[Category: Rivas, M de las]]
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[[Category: Schjoldager KT]]
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[[Category: Schjoldager, K T]]
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[[Category: Vakhrushev SY]]
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[[Category: Vakhrushev, S Y]]
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[[Category: De las Rivas M]]
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[[Category: F104s mutant]]
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[[Category: Flexible loop]]
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[[Category: Galnac-t2]]
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[[Category: Glycosyltransferase]]
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[[Category: Hdl]]
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[[Category: Inactive/active state]]
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[[Category: Transferase]]
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Current revision

Crystal structure of the GalNAc-T2 F104S mutant in complex with UDP-GalNAc

PDB ID 6egs

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