This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.




6wt5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:16, 6 November 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='6wt5' size='340' side='right'caption='[[6wt5]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
<StructureSection load='6wt5' size='340' side='right'caption='[[6wt5]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6wt5]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_51502 Atcc 51502]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6WT5 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6WT5 FirstGlance]. <br>
+
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6WT5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6WT5 FirstGlance]. <br>
-
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">NCTC12948_02565 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=45242 ATCC 51502])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6wt5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6wt5 OCA], [http://pdbe.org/6wt5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6wt5 RCSB], [http://www.ebi.ac.uk/pdbsum/6wt5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6wt5 ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6wt5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6wt5 OCA], [https://pdbe.org/6wt5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6wt5 RCSB], [https://www.ebi.ac.uk/pdbsum/6wt5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6wt5 ProSAT]</span></td></tr>
</table>
</table>
-
<div style="background-color:#fffaf0;">
 
-
== Publication Abstract from PubMed ==
 
-
Stimulator of interferon genes (STING) is a receptor in human cells that senses foreign cyclic dinucleotides released during bacterial infection and endogenous cyclic GMP-AMP signalling during viral infection and antitumour immunity(1-5). STING shares no structural homology with other known signalling proteins(6-9), limiting functional analysis and preventing explanation of the origin of cyclic dinucleotide signalling in mammalian innate immunity. Here we discover functional STING homologues encoded within prokaryotic defence islands and reveal a conserved mechanism of signal activation. Crystal structures of bacterial STING define a minimal homodimeric scaffold that selectively responds to c-di-GMP synthesized by a neighbouring cGAS/DncV-like nucleotidyltransferase (CD-NTase) enzyme. Bacterial STING domains couple cyclic dinucleotide recognition with protein filament formation to drive TIR effector domain oligomerization and rapid NAD(+) cleavage. We reconstruct the evolutionary events following acquisition of STING into metazoan innate immunity and determine the structure of a full-length TIR-STING fusion from the Pacific oyster Crassostrea gigas. Comparative structural analysis demonstrates how metazoan-specific additions to the core STING scaffold enabled a switch from direct effector function to regulation of antiviral transcription. Together, our results explain the mechanism of STING-dependent signalling and reveal conservation of a functional cGAS-STING pathway in prokaryotic bacteriophage defence.
 
-
STING cyclic dinucleotide sensing originated in bacteria.,Morehouse BR, Govande AA, Millman A, Keszei AFA, Lowey B, Ofir G, Shao S, Sorek R, Kranzusch PJ Nature. 2020 Sep 2. pii: 10.1038/s41586-020-2719-5. doi:, 10.1038/s41586-020-2719-5. PMID:32877915<ref>PMID:32877915</ref>
+
==See Also==
-
 
+
*[[Stimulator of interferon genes protein 3D structures|Stimulator of interferon genes protein 3D structures]]
-
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
+
-
</div>
+
-
<div class="pdbe-citations 6wt5" style="background-color:#fffaf0;"></div>
+
-
== References ==
+
-
<references/>
+
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Atcc 51502]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Govande, A A]]
+
[[Category: Govande AA]]
-
[[Category: Keszei, A F.A]]
+
[[Category: Keszei AFA]]
-
[[Category: Kranzusch, P J]]
+
[[Category: Kranzusch PJ]]
-
[[Category: Lowey, B]]
+
[[Category: Lowey B]]
-
[[Category: Millman, A]]
+
[[Category: Millman A]]
-
[[Category: Morehouse, B R]]
+
[[Category: Morehouse BR]]
-
[[Category: Ofir, G]]
+
[[Category: Ofir G]]
-
[[Category: Shao, S]]
+
[[Category: Shao S]]
-
[[Category: Sorek, R]]
+
[[Category: Sorek R]]
-
[[Category: Cbass]]
+
-
[[Category: Cd-ntase]]
+
-
[[Category: Cyclic dinucleotide receptor]]
+
-
[[Category: Immune effector]]
+
-
[[Category: Immune system]]
+

Current revision

Structure of a bacterial STING receptor from Capnocytophaga granulosa

PDB ID 6wt5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools