7k7h

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Current revision (13:38, 6 November 2024) (edit) (undo)
 
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==Density-fitted Model Structure of Antibody Variable Domains of TyTx1 in Complex with PltB pentamer of Typhoid Toxin==
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<StructureSection load='7k7h' size='340' side='right'caption='[[7k7h]]' scene=''>
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<StructureSection load='7k7h' size='340' side='right'caption='[[7k7h]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol= FirstGlance]. <br>
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<table><tr><td colspan='2'>[[7k7h]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus] and [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18 Salmonella enterica subsp. enterica serovar Typhi str. CT18]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7K7H OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7K7H FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7k7h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7k7h OCA], [https://pdbe.org/7k7h PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7k7h RCSB], [https://www.ebi.ac.uk/pdbsum/7k7h PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7k7h ProSAT]</span></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7k7h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7k7h OCA], [https://pdbe.org/7k7h PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7k7h RCSB], [https://www.ebi.ac.uk/pdbsum/7k7h PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7k7h ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q8Z6A3_SALTI Q8Z6A3_SALTI]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Many bacterial pathogens secrete A((2))B(5) toxins comprising two functionally distinct yet complementary "A" and "B" subunits to benefit the pathogens during infection. The lectin-like pentameric B subunits recognize specific sets of host glycans to deliver the toxin into target host cells. Here, we offer the molecular mechanism by which neutralizing antibodies, which have the potential to bind to all glycan-receptor binding sites and thus completely inhibit toxin binding to host cells, are inhibited from exerting this action. Cryogenic electron microscopy (cryo-EM)-based analyses indicate that the skewed positioning of the toxin A subunit(s) toward one side of the toxin B pentamer inhibited neutralizing antibody binding to the laterally located epitopes, rendering some glycan-receptor binding sites that remained available for the toxin binding and endocytosis process, which is strikingly different from the counterpart antibodies recognizing the far side-located epitopes. These results highlight additional features of the toxin-antibody interactions and offer important insights into anti-toxin strategies.
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The structural basis of Salmonella A(2)B(5) toxin neutralization by antibodies targeting the glycan-receptor binding subunits.,Nguyen T, Richards AF, Neupane DP, Feathers JR, Yang YA, Sim JH, Byun H, Lee S, Ahn C, Van Slyke G, Fromme JC, Mantis NJ, Song J Cell Rep. 2021 Sep 7;36(10):109654. doi: 10.1016/j.celrep.2021.109654. PMID:34496256<ref>PMID:34496256</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 7k7h" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Antibody 3D structures|Antibody 3D structures]]
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*[[Pertussis toxin|Pertussis toxin]]
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Z-disk]]
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[[Category: Mus musculus]]
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[[Category: Salmonella enterica subsp. enterica serovar Typhi str. CT18]]
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[[Category: Feathers JR]]
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[[Category: Fromme JC]]
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[[Category: Nguyen T]]
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[[Category: Song J]]

Current revision

Density-fitted Model Structure of Antibody Variable Domains of TyTx1 in Complex with PltB pentamer of Typhoid Toxin

PDB ID 7k7h

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