7y0g
From Proteopedia
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7y0g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7y0g OCA], [https://pdbe.org/7y0g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7y0g RCSB], [https://www.ebi.ac.uk/pdbsum/7y0g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7y0g ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7y0g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7y0g OCA], [https://pdbe.org/7y0g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7y0g RCSB], [https://www.ebi.ac.uk/pdbsum/7y0g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7y0g ProSAT]</span></td></tr> | ||
</table> | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Covalent attachment of methoxy poly(ethylene) glycol (mPEG) to therapeutic molecules is widely employed to improve their systemic circulation time and therapeutic efficacy. mPEG, however, can induce anti-PEG antibodies that negatively impact drug therapeutic effects. However, the underlying mechanism for specific binding of antibodies to mPEG remains unclear. Here, we determined the first co-crystal structure of the humanized 15-2b anti-mPEG antibody in complex with mPEG, which possesses a deep pocket in the antigen-binding site to accommodate the mPEG polymer. Structural and mutational analyses revealed that mPEG binds to h15-2b via Van der Waals and hydrogen bond interactions, whereas the methoxy group of mPEG is stabilized in a hydrophobic environment between the V(H):V(L) interface. Replacement of the heavy chain hydrophobic V37 residue with a neutral polar serine or threonine residue offers additional hydrogen bond interactions with methoxyl and hydroxyl groups, resulting in cross-reactivity to mPEG and OH-PEG. Our findings provide insights into understanding mPEG-binding specificity and antigenicity of anti-mPEG antibodies. | ||
+ | |||
+ | Structural determination of an antibody that specifically recognizes polyethylene glycol with a terminal methoxy group.,Nguyen MT, Shih YC, Lin MH, Roffler SR, Hsiao CY, Cheng TL, Lin WW, Lin EC, Jong YJ, Chang CY, Su YC Commun Chem. 2022;5(1):88. doi: 10.1038/s42004-022-00709-0. Epub 2022 Aug 1. PMID:35936993<ref>PMID:35936993</ref> | ||
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+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 7y0g" style="background-color:#fffaf0;"></div> | ||
==See Also== | ==See Also== | ||
*[[Antibody 3D structures|Antibody 3D structures]] | *[[Antibody 3D structures|Antibody 3D structures]] | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> |
Current revision
Crystal structure of anti-mPEG h15-2b Fab
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Categories: Homo sapiens | Large Structures | Chang CY | Lin EC | Nguyen TMT | Su YC