7y0g

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Current revision (14:14, 6 November 2024) (edit) (undo)
 
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7y0g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7y0g OCA], [https://pdbe.org/7y0g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7y0g RCSB], [https://www.ebi.ac.uk/pdbsum/7y0g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7y0g ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7y0g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7y0g OCA], [https://pdbe.org/7y0g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7y0g RCSB], [https://www.ebi.ac.uk/pdbsum/7y0g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7y0g ProSAT]</span></td></tr>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Covalent attachment of methoxy poly(ethylene) glycol (mPEG) to therapeutic molecules is widely employed to improve their systemic circulation time and therapeutic efficacy. mPEG, however, can induce anti-PEG antibodies that negatively impact drug therapeutic effects. However, the underlying mechanism for specific binding of antibodies to mPEG remains unclear. Here, we determined the first co-crystal structure of the humanized 15-2b anti-mPEG antibody in complex with mPEG, which possesses a deep pocket in the antigen-binding site to accommodate the mPEG polymer. Structural and mutational analyses revealed that mPEG binds to h15-2b via Van der Waals and hydrogen bond interactions, whereas the methoxy group of mPEG is stabilized in a hydrophobic environment between the V(H):V(L) interface. Replacement of the heavy chain hydrophobic V37 residue with a neutral polar serine or threonine residue offers additional hydrogen bond interactions with methoxyl and hydroxyl groups, resulting in cross-reactivity to mPEG and OH-PEG. Our findings provide insights into understanding mPEG-binding specificity and antigenicity of anti-mPEG antibodies.
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Structural determination of an antibody that specifically recognizes polyethylene glycol with a terminal methoxy group.,Nguyen MT, Shih YC, Lin MH, Roffler SR, Hsiao CY, Cheng TL, Lin WW, Lin EC, Jong YJ, Chang CY, Su YC Commun Chem. 2022;5(1):88. doi: 10.1038/s42004-022-00709-0. Epub 2022 Aug 1. PMID:35936993<ref>PMID:35936993</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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<div class="pdbe-citations 7y0g" style="background-color:#fffaf0;"></div>
==See Also==
==See Also==
*[[Antibody 3D structures|Antibody 3D structures]]
*[[Antibody 3D structures|Antibody 3D structures]]
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== References ==
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<references/>
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</StructureSection>
</StructureSection>

Current revision

Crystal structure of anti-mPEG h15-2b Fab

PDB ID 7y0g

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