Argonaute 3D structures
From Proteopedia
(Difference between revisions)
| Line 13: | Line 13: | ||
**[[3vnb]] – AtAGO1 MID domain (mutant)<br /> | **[[3vnb]] – AtAGO1 MID domain (mutant)<br /> | ||
**[[4g0q]], [[4g0y]], [[4g0z]] – AtAGO1 MID domain + nucleotide<br /> | **[[4g0q]], [[4g0y]], [[4g0z]] – AtAGO1 MID domain + nucleotide<br /> | ||
| + | **[[8r3z]] - AGO1 + RNA – ''Candidatus harpoatesius'' – Cryo EM<br /> | ||
| - | *Argonaute 2 | + | *Argonaute 2; Domains – PAZ 227-352; MID 439-575 |
**[[3luc]], [[3luk]] – hAGO2 MID domain <br /> | **[[3luc]], [[3luk]] – hAGO2 MID domain <br /> | ||
| - | **[[3lud]], [[3lug]], [[3luh]], [[3luj]], [[3qx8]], [[3qx9]], [[7c6b]], [[7d7u]] – hAGO2 MID domain + nucleotide<br /> | + | **[[3lud]], [[3lug]], [[3luh]], [[3luj]], [[3qx8]], [[3qx9]], [[7c6b]], [[7d7u]], [[9bf0]], [[9bf2]] – hAGO2 MID domain + nucleotide<br /> |
| - | **[[ | + | **[[9bez]] – hAGO2 MID domain + RNA<br /> |
| + | **[[8thq]] – hAGO2 PAZ domain + RNA <br /> | ||
| + | **[[4f3t]], [[4ola]], [[4olb]], [[4w5o]], [[5ki6]], [[5t7b]], [[6ra4]], [[8d6j]], [[8d71]] – hAGO2 + RNA <br /> | ||
| + | **[[4w5n]], [[4w5q]], [[4w5r]], [[4w5t]], [[4z4i]], [[4z4h]], [[4z4g]], [[4z4f]], [[4z4e]], [[4z4d]], [[4z4c]], [[4ola]], [[5js1]], [[5js2]], [[5wea]], [[6cbd]], [[6mdz]], [[6mfn]], [[6mfr]], [[6n4o]], [[6nit]] – hAGO2 (mutant) + RNA <br /> | ||
**[[4olb]] - hAGO2 (mutant) + RNA + tryptophan<br /> | **[[4olb]] - hAGO2 (mutant) + RNA + tryptophan<br /> | ||
**[[4f3t]], [[4w5o]], [[5t7b]] – hAGO2 + RNA <br /> | **[[4f3t]], [[4w5o]], [[5t7b]] – hAGO2 + RNA <br /> | ||
| - | + | **[[7ki3]] – hAGO2 + RNA + Hepatitis C RNA<br /> | |
| - | **[[7ki3]] – hAGO2 + | + | |
**[[1r6z]] – DmAGO2 PAZ domain/MBP <br /> | **[[1r6z]] – DmAGO2 PAZ domain/MBP <br /> | ||
**[[1vyn]] – DmAGO2 PAZ domain - NMR <br /> | **[[1vyn]] – DmAGO2 PAZ domain - NMR <br /> | ||
| Line 31: | Line 34: | ||
*Argonaute 3 | *Argonaute 3 | ||
| - | **[[5vm9]] – hAGO3 + RNA <br /> | + | **[[5vm9]], [[8vaj]] – hAGO3 + RNA <br /> |
*Argonaute 4 | *Argonaute 4 | ||
| Line 39: | Line 42: | ||
*Argonaute 10 | *Argonaute 10 | ||
| - | **[[7swf]] – AtAGO10 + RNA – Cryo EM<br /> | + | **[[7sva]], [[7swf]], [[7swq]] – AtAGO10 + RNA – Cryo EM<br /> |
*Argonaute | *Argonaute | ||
| - | **[[1u04]], [[1z25]], [[1z26]] – | + | **[[1u04]], [[1z25]], [[1z26]] – PfAGO (mutant) – ''Pyrococcus furiosus'' <br /> |
| + | **[[8jpx]] – PfAGO + DNA – Cryo EM<br /> | ||
**[[2f8s]], [[2f8t]] – AaAGO + RNA – ''Aquifex aeolicus''<br /> | **[[2f8s]], [[2f8t]] – AaAGO + RNA – ''Aquifex aeolicus''<br /> | ||
**[[2f8t]], [[2nub]] – AaAGO <br /> | **[[2f8t]], [[2nub]] – AaAGO <br /> | ||
| - | **[[3da5]] – | + | **[[3da5]] – TtAGO – ''Thermococcus thioreducens''<br /> |
| + | **[[8jsi]], [[8wd8]] – TtAGO + DNA – Cryo EM<br /> | ||
| + | **[[8j84]], [[8u7b]] – AGO + TIR-APAZ – ''Thermoflavidium thermophilus''<br /> | ||
| + | **[[8qlo]] – AGO + TIR-APAZ – ''Bacillales bacterium''<br /> | ||
**[[3dlb]], [[3dlh]], [[3f73]], [[3hm9]], [[3hvr]], [[3hxm]], [[4n41]], [[4n47]], [[4n76]], [[4nca]], [[4ncb]], [[5gq9]] – TtAGO + DNA – ''Thermus thermophilus''<br /> | **[[3dlb]], [[3dlh]], [[3f73]], [[3hm9]], [[3hvr]], [[3hxm]], [[4n41]], [[4n47]], [[4n76]], [[4nca]], [[4ncb]], [[5gq9]] – TtAGO + DNA – ''Thermus thermophilus''<br /> | ||
**[[3hjf]], [[3hk2]], [[3ho1]] – TtAGO (mutant) + DNA <br /> | **[[3hjf]], [[3hk2]], [[3ho1]] – TtAGO (mutant) + DNA <br /> | ||
| Line 55: | Line 62: | ||
**[[6qzk]] – AGO (mutant) + DNA – ''Clostridium butyricum''<br /> | **[[6qzk]] – AGO (mutant) + DNA – ''Clostridium butyricum''<br /> | ||
**[[7r8f]], [[7r8k]] – PlAGO – ''Pseudooceanicola lipolyticus''<br /> | **[[7r8f]], [[7r8k]] – PlAGO – ''Pseudooceanicola lipolyticus''<br /> | ||
| - | **[[7r8g]], [[7r8h]], [[7r8j]] – PlAGO + DNA <br /> | + | **[[7r8g]], [[7r8h]], [[7r8i]], [[7r8j]] – PlAGO + DNA <br /> |
| + | **[[8ok9]] – AGO + AGO-N + DNA – ''Archaeoglobus fulgidus''<br /> | ||
}} | }} | ||
[[Category: Topic Page]] | [[Category: Topic Page]] | ||
Current revision
3D Structures of Argonaute
Updated on 11-November-2024
