2dpw

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (00:52, 21 November 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='2dpw' size='340' side='right'caption='[[2dpw]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
<StructureSection load='2dpw' size='340' side='right'caption='[[2dpw]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2dpw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thet8 Thet8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DPW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DPW FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2dpw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DPW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DPW FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dpw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dpw OCA], [https://pdbe.org/2dpw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dpw RCSB], [https://www.ebi.ac.uk/pdbsum/2dpw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dpw ProSAT], [https://www.topsan.org/Proteins/RSGI/2dpw TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dpw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dpw OCA], [https://pdbe.org/2dpw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dpw RCSB], [https://www.ebi.ac.uk/pdbsum/2dpw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dpw ProSAT], [https://www.topsan.org/Proteins/RSGI/2dpw TOPSAN]</span></td></tr>
</table>
</table>
Line 13: Line 13:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dp/2dpw_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dp/2dpw_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 21: Line 21:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Thet8]]
+
[[Category: Thermus thermophilus HB8]]
-
[[Category: Structural genomic]]
+
[[Category: Rehse PH]]
-
[[Category: Rehse, P H]]
+
[[Category: Yokoyama S]]
-
[[Category: Yokoyama, S]]
+
-
[[Category: National project on protein structural and functional analyse]]
+
-
[[Category: Nppsfa]]
+
-
[[Category: Rsgi]]
+
-
[[Category: Transferase]]
+
-
[[Category: Unknown function]]
+

Current revision

Hpothetical Transferase Structure from Thermus thermophilus

PDB ID 2dpw

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools