2iw3

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (01:04, 21 November 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='2iw3' size='340' side='right'caption='[[2iw3]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
<StructureSection load='2iw3' size='340' side='right'caption='[[2iw3]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2iw3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_18824 Atcc 18824]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IW3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IW3 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2iw3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IW3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IW3 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2iwh|2iwh]], [[2ix3|2ix3]]</div></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2iw3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2iw3 OCA], [https://pdbe.org/2iw3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2iw3 RCSB], [https://www.ebi.ac.uk/pdbsum/2iw3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2iw3 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2iw3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2iw3 OCA], [https://pdbe.org/2iw3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2iw3 RCSB], [https://www.ebi.ac.uk/pdbsum/2iw3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2iw3 ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/EF3A_YEAST EF3A_YEAST] Required for the ATP-dependent release of deacylated tRNA from the ribosomal E-site during protein biosynthesis. Stimulates the eEF1A-dependent binding of aminoacyl-tRNA to the ribosomal A-site, which has reduced affinity for tRNA as long as the E-site is occupied.<ref>PMID:6456269</ref> <ref>PMID:7657623</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 14: Line 15:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/iw/2iw3_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/iw/2iw3_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 35: Line 36:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Atcc 18824]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Anand, M]]
+
[[Category: Saccharomyces cerevisiae]]
-
[[Category: Andersen, C B.F]]
+
[[Category: Anand M]]
-
[[Category: Andersen, G R]]
+
[[Category: Andersen CBF]]
-
[[Category: Balar, B]]
+
[[Category: Andersen GR]]
-
[[Category: Becker, T]]
+
[[Category: Balar B]]
-
[[Category: Beckmann, R]]
+
[[Category: Becker T]]
-
[[Category: Blau, M]]
+
[[Category: Beckmann R]]
-
[[Category: Boesen, T]]
+
[[Category: Blau M]]
-
[[Category: Halic, M]]
+
[[Category: Boesen T]]
-
[[Category: Kinzy, T G]]
+
[[Category: Halic M]]
-
[[Category: Mielke, T]]
+
[[Category: Kinzy TG]]
-
[[Category: Pedersen, J S]]
+
[[Category: Mielke T]]
-
[[Category: Spahn, C M.T]]
+
[[Category: Pedersen JS]]
-
[[Category: Acetylation]]
+
[[Category: Spahn CMT]]
-
[[Category: Atp-binding]]
+
-
[[Category: Elongation factor]]
+
-
[[Category: Nucleotide-binding]]
+
-
[[Category: Phosphorylation]]
+
-
[[Category: Protein biosynthesis]]
+
-
[[Category: Rna-binding]]
+
-
[[Category: Rrna-binding]]
+
-
[[Category: Translation]]
+

Current revision

Elongation Factor 3 in complex with ADP

PDB ID 2iw3

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools