2pkw
From Proteopedia
(Difference between revisions)
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<StructureSection load='2pkw' size='340' side='right'caption='[[2pkw]], [[Resolution|resolution]] 2.10Å' scene=''> | <StructureSection load='2pkw' size='340' side='right'caption='[[2pkw]], [[Resolution|resolution]] 2.10Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2pkw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[2pkw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PKW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PKW FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr> |
| - | + | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pkw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pkw OCA], [https://pdbe.org/2pkw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pkw RCSB], [https://www.ebi.ac.uk/pdbsum/2pkw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pkw ProSAT], [https://www.topsan.org/Proteins/NESGC/2pkw TOPSAN]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pkw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pkw OCA], [https://pdbe.org/2pkw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pkw RCSB], [https://www.ebi.ac.uk/pdbsum/2pkw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pkw ProSAT], [https://www.topsan.org/Proteins/NESGC/2pkw TOPSAN]</span></td></tr> | ||
</table> | </table> | ||
| - | == Function == | ||
| - | [[https://www.uniprot.org/uniprot/RSMJ_SALTY RSMJ_SALTY]] Specifically methylates the guanosine in position 1516 of 16S rRNA.[HAMAP-Rule:MF_01523] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pk/2pkw_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pk/2pkw_consurf.spt"</scriptWhenChecked> | ||
| - | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> |
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: | + | [[Category: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]] |
| - | [[Category: Acton | + | [[Category: Acton TB]] |
| - | [[Category: Cunningham | + | [[Category: Cunningham K]] |
| - | [[Category: Fang | + | [[Category: Fang Y]] |
| - | [[Category: Forouhar | + | [[Category: Forouhar F]] |
| - | [[Category: Hunt | + | [[Category: Hunt JF]] |
| - | [[Category: Liu | + | [[Category: Liu J]] |
| - | [[Category: Ma | + | [[Category: Ma L-C]] |
| - | [[Category: Montelione | + | [[Category: Montelione GT]] |
| - | + | [[Category: Owens L]] | |
| - | [[Category: Owens | + | [[Category: Seetharaman J]] |
| - | [[Category: Seetharaman | + | [[Category: Su M]] |
| - | [[Category: Su | + | [[Category: Tong L]] |
| - | [[Category: Tong | + | [[Category: Xiao R]] |
| - | [[Category: Xiao | + | |
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Current revision
Crystal structure of UPF0341 protein yhiQ from Salmonella typhimurium, Northeast Structural Genomics Consortium Target StR221
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