2ra8

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (01:24, 21 November 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='2ra8' size='340' side='right'caption='[[2ra8]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
<StructureSection load='2ra8' size='340' side='right'caption='[[2ra8]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2ra8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacfr Bacfr]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RA8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RA8 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2ra8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_fragilis_YCH46 Bacteroides fragilis YCH46]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RA8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RA8 FirstGlance]. <br>
-
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CAS:S-(DIMETHYLARSENIC)CYSTEINE'>CAS</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BF1877 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=295405 BACFR])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CAS:S-(DIMETHYLARSENIC)CYSTEINE'>CAS</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ra8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ra8 OCA], [https://pdbe.org/2ra8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ra8 RCSB], [https://www.ebi.ac.uk/pdbsum/2ra8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ra8 ProSAT], [https://www.topsan.org/Proteins/NESGC/2ra8 TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ra8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ra8 OCA], [https://pdbe.org/2ra8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ra8 RCSB], [https://www.ebi.ac.uk/pdbsum/2ra8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ra8 ProSAT], [https://www.topsan.org/Proteins/NESGC/2ra8 TOPSAN]</span></td></tr>
</table>
</table>
Line 13: Line 13:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ra/2ra8_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ra/2ra8_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 20: Line 20:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bacfr]]
+
[[Category: Bacteroides fragilis YCH46]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Abashidze, M]]
+
[[Category: Abashidze M]]
-
[[Category: Acton, T B]]
+
[[Category: Acton TB]]
-
[[Category: Cunningham, K]]
+
[[Category: Cunningham K]]
-
[[Category: Hunt, J F]]
+
[[Category: Hunt JF]]
-
[[Category: Maglaqui, M]]
+
[[Category: Maglaqui M]]
-
[[Category: Montelione, G T]]
+
[[Category: Montelione GT]]
-
[[Category: Structural genomic]]
+
[[Category: Owens L]]
-
[[Category: Owens, L]]
+
[[Category: Seetharaman J]]
-
[[Category: Seetharaman, J]]
+
[[Category: Tong L]]
-
[[Category: Tong, L]]
+
[[Category: Vorobiev SM]]
-
[[Category: Vorobiev, S M]]
+
[[Category: Wang D]]
-
[[Category: Wang, D]]
+
[[Category: Xiao R]]
-
[[Category: Xiao, R]]
+
-
[[Category: Bfr43]]
+
-
[[Category: Leucine rich repeat]]
+
-
[[Category: Lrr domain]]
+
-
[[Category: Nesg]]
+
-
[[Category: PSI, Protein structure initiative]]
+
-
[[Category: Q64v53]]
+
-
[[Category: Unknown function]]
+
-
[[Category: Wgr domain]]
+

Current revision

Crystal structure of the Q64V53_BACFR protein from Bacteroides fragilis. Northeast Structural Genomics Consortium target BfR43

PDB ID 2ra8

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools