3mej

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (02:07, 21 November 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='3mej' size='340' side='right'caption='[[3mej]], [[Resolution|resolution]] 2.49&Aring;' scene=''>
<StructureSection load='3mej' size='340' side='right'caption='[[3mej]], [[Resolution|resolution]] 2.49&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3mej]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"vibrio_subtilis"_ehrenberg_1835 "vibrio subtilis" ehrenberg 1835]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MEJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3MEJ FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3mej]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MEJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3MEJ FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.491&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BSU35840, ywtF ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 "Vibrio subtilis" Ehrenberg 1835])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3mej FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mej OCA], [https://pdbe.org/3mej PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3mej RCSB], [https://www.ebi.ac.uk/pdbsum/3mej PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3mej ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3mej FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mej OCA], [http://pdbe.org/3mej PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3mej RCSB], [http://www.ebi.ac.uk/pdbsum/3mej PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3mej ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/TAGT_BACSU TAGT_BACSU] May catalyze the final step in cell wall teichoic acid biosynthesis, the transfer of the anionic cell wall polymers (APs) from their lipid-linked precursor to the cell wall peptidoglycan (PG).<ref>PMID:21964069</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 14: Line 15:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/me/3mej_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/me/3mej_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3mej ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3mej ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
 +
== References ==
 +
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Vibrio subtilis ehrenberg 1835]]
+
[[Category: Bacillus subtilis]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Acton, T B]]
+
[[Category: Acton TB]]
-
[[Category: Ciccosanti, C]]
+
[[Category: Ciccosanti C]]
-
[[Category: Everett, J K]]
+
[[Category: Everett JK]]
-
[[Category: Hunt, J F]]
+
[[Category: Hunt JF]]
-
[[Category: Kuzin, A]]
+
[[Category: Kuzin A]]
-
[[Category: Lee, D]]
+
[[Category: Lee D]]
-
[[Category: Mao, M]]
+
[[Category: Mao M]]
-
[[Category: Montelione, G T]]
+
[[Category: Montelione GT]]
-
[[Category: Structural genomic]]
+
[[Category: Nair R]]
-
[[Category: Nair, R]]
+
[[Category: Rost B]]
-
[[Category: Rost, B]]
+
[[Category: Seetharaman J]]
-
[[Category: Seetharaman, J]]
+
[[Category: Su M]]
-
[[Category: Su, M]]
+
[[Category: Tong L]]
-
[[Category: Tong, L]]
+
[[Category: Xiao R]]
-
[[Category: Xiao, R]]
+
-
[[Category: Nesg]]
+
-
[[Category: PSI, Protein structure initiative]]
+
-
[[Category: Transcriptional regulator]]
+

Current revision

Crystal structure of putative transcriptional regulator ywtF from Bacillus subtilis, Northeast Structural Genomics Consortium Target SR736

PDB ID 3mej

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools