3v7p

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Current revision (02:32, 21 November 2024) (edit) (undo)
 
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<StructureSection load='3v7p' size='340' side='right'caption='[[3v7p]], [[Resolution|resolution]] 1.35&Aring;' scene=''>
<StructureSection load='3v7p' size='340' side='right'caption='[[3v7p]], [[Resolution|resolution]] 1.35&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3v7p]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Nitsb Nitsb]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3V7P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3V7P FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3v7p]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Nitratiruptor_sp._SB155-2 Nitratiruptor sp. SB155-2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3V7P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3V7P FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BCT:BICARBONATE+ION'>BCT</scene>, <scene name='pdbligand=BEZ:BENZOIC+ACID'>BEZ</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=TLA:L(+)-TARTARIC+ACID'>TLA</scene>, <scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.35&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">NIS_0429 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=387092 NITSB])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BCT:BICARBONATE+ION'>BCT</scene>, <scene name='pdbligand=BEZ:BENZOIC+ACID'>BEZ</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=TLA:L(+)-TARTARIC+ACID'>TLA</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3v7p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3v7p OCA], [https://pdbe.org/3v7p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3v7p RCSB], [https://www.ebi.ac.uk/pdbsum/3v7p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3v7p ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3v7p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3v7p OCA], [https://pdbe.org/3v7p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3v7p RCSB], [https://www.ebi.ac.uk/pdbsum/3v7p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3v7p ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
 
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[[https://www.uniprot.org/uniprot/MQNX_NITSB MQNX_NITSB]] Catalyzes the deamination of aminodeoxyfutalosine (AFL) into futalosine (FL), a step in the biosynthesis of menaquinone (MK, vitamin K2). To a lesser extent, can also deaminate 5'-methylthioadenosine.<ref>PMID:23972005</ref>
 
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==See Also==
 
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*[[NAD kinase|NAD kinase]]
 
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== References ==
 
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<references/>
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Nitsb]]
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[[Category: Nitratiruptor sp. SB155-2]]
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[[Category: Almo, S C]]
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[[Category: Almo SC]]
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[[Category: Bhosle, R]]
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[[Category: Bhosle R]]
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[[Category: Chowdhury, S]]
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[[Category: Chowdhury S]]
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[[Category: EFI, Enzyme Function Initiative]]
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[[Category: Evans B]]
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[[Category: Evans, B]]
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[[Category: Gerlt JA]]
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[[Category: Gerlt, J A]]
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[[Category: Hammonds J]]
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[[Category: Glenn, A Scott]]
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[[Category: Hillerich B]]
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[[Category: Hammonds, J]]
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[[Category: Imker HJ]]
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[[Category: Hillerich, B]]
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[[Category: Patskovsky Y]]
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[[Category: Imker, H J]]
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[[Category: Raushel FM]]
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[[Category: Patskovsky, Y]]
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[[Category: Scott Glenn A]]
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[[Category: Raushel, F M]]
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[[Category: Seidel RD]]
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[[Category: Seidel, R D]]
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[[Category: Toro R]]
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[[Category: Toro, R]]
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[[Category: Washington E]]
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[[Category: Washington, E]]
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[[Category: Zencheck WD]]
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[[Category: Zencheck, W D]]
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[[Category: Amidohydrolase]]
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[[Category: Efi]]
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[[Category: Enzyme function initiative]]
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[[Category: Hydrolase]]
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[[Category: Iron binding site]]
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[[Category: Structural genomic]]
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Current revision

Crystal structure of amidohydrolase nis_0429 (target efi-500396) from Nitratiruptor sp. sb155-2

PDB ID 3v7p

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OCA

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