3vyk

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Current revision (02:34, 21 November 2024) (edit) (undo)
 
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<StructureSection load='3vyk' size='340' side='right'caption='[[3vyk]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
<StructureSection load='3vyk' size='340' side='right'caption='[[3vyk]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3vyk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VYK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VYK FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3vyk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VYK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VYK FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=MMA:O1-METHYL-MANNOSE'>MMA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3vyj|3vyj]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=MMA:O1-METHYL-MANNOSE'>MMA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Dcir2 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vyk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vyk OCA], [https://pdbe.org/3vyk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vyk RCSB], [https://www.ebi.ac.uk/pdbsum/3vyk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vyk ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vyk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vyk OCA], [https://pdbe.org/3vyk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vyk RCSB], [https://www.ebi.ac.uk/pdbsum/3vyk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vyk ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q5YIR8_MOUSE Q5YIR8_MOUSE]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Lk3 transgenic mice]]
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[[Category: Mus musculus]]
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[[Category: Hanashima, S]]
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[[Category: Hanashima S]]
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[[Category: Ikeda, A]]
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[[Category: Ikeda A]]
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[[Category: Matsumoto, N]]
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[[Category: Matsumoto N]]
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[[Category: Nagae, M]]
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[[Category: Nagae M]]
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[[Category: Satoh, T]]
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[[Category: Satoh T]]
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[[Category: Yamaguchi, Y]]
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[[Category: Yamaguchi Y]]
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[[Category: Yamamoto, K]]
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[[Category: Yamamoto K]]
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[[Category: Yamanaka, K]]
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[[Category: Yamanaka K]]
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[[Category: C-type lectin fold]]
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[[Category: Carbohydrate binding protein]]
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[[Category: Cell surface]]
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Current revision

Crystal structure of C-type lectin domain of murine dendritic cell inhibitory receptor 2 in complex with N-glycan

PDB ID 3vyk

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

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