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| ==Crystal structure of SeMet-labeled mavirus penton protein== | | ==Crystal structure of SeMet-labeled mavirus penton protein== |
- | <StructureSection load='6g41' size='340' side='right' caption='[[6g41]], [[Resolution|resolution]] 2.90Å' scene=''> | + | <StructureSection load='6g41' size='340' side='right'caption='[[6g41]], [[Resolution|resolution]] 2.90Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[6g41]] is a 10 chain structure with sequence from [http://en.wikipedia.org/wiki/Cafeteriavirus-dependent_mavirus Cafeteriavirus-dependent mavirus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6G41 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6G41 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6g41]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Cafeteriavirus-dependent_mavirus Cafeteriavirus-dependent mavirus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6G41 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6G41 FirstGlance]. <br> |
- | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9Å</td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">MV17, Mvrk_gpp17 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1932923 Cafeteriavirus-dependent mavirus])</td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6g41 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6g41 OCA], [http://pdbe.org/6g41 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6g41 RCSB], [http://www.ebi.ac.uk/pdbsum/6g41 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6g41 ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6g41 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6g41 OCA], [https://pdbe.org/6g41 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6g41 RCSB], [https://www.ebi.ac.uk/pdbsum/6g41 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6g41 ProSAT]</span></td></tr> |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/A0A1L4BKA3_9VIRU A0A1L4BKA3_9VIRU] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| </StructureSection> | | </StructureSection> |
| [[Category: Cafeteriavirus-dependent mavirus]] | | [[Category: Cafeteriavirus-dependent mavirus]] |
- | [[Category: Born, D]] | + | [[Category: Large Structures]] |
- | [[Category: Meinhart, A]] | + | [[Category: Born D]] |
- | [[Category: Reinstein, J]] | + | [[Category: Meinhart A]] |
- | [[Category: Reuter, L]] | + | [[Category: Reinstein J]] |
- | [[Category: Capsid protein]]
| + | [[Category: Reuter L]] |
- | [[Category: Single jelly-roll]]
| + | |
- | [[Category: Viral protein]]
| + | |
- | [[Category: Virus]]
| + | |
| Structural highlights
Function
A0A1L4BKA3_9VIRU
Publication Abstract from PubMed
Virophages have the unique property of parasitizing giant viruses within unicellular hosts. Little is understood about how they form infectious virions in this tripartite interplay. We provide mechanistic insights into assembly and maturation of mavirus, a marine virophage, by combining structural and stability studies on capsomers, virus-like particles (VLPs), and native virions. We found that the mavirus protease processes the double jelly-roll (DJR) major capsid protein (MCP) at multiple C-terminal sites and that these sites are conserved among virophages. Mavirus MCP assembled in Escherichia coli in the absence and presence of penton protein, forming VLPs with defined size and shape. While quantifying VLPs in E. coli lysates, we found that full-length rather than processed MCP is the competent state for capsid assembly. Full-length MCP was thermally more labile than truncated MCP, and crystal structures of both states indicate that full-length MCP has an expanded DJR core. Thus, we propose that the MCP C-terminal domain serves as a scaffolding domain by adding strain on MCP to confer assembly competence. Mavirus protease processed MCP more efficiently after capsid assembly, which provides a regulation mechanism for timing capsid maturation. By analogy to Sputnik and adenovirus, we propose that MCP processing renders mavirus particles infection competent by loosening interactions between genome and capsid shell and destabilizing pentons for genome release into host cells. The high structural similarity of mavirus and Sputnik capsid proteins together with conservation of protease and MCP processing suggest that assembly and maturation mechanisms described here are universal for virophages.
Capsid protein structure, self-assembly, and processing reveal morphogenesis of the marine virophage mavirus.,Born D, Reuter L, Mersdorf U, Mueller M, Fischer MG, Meinhart A, Reinstein J Proc Natl Acad Sci U S A. 2018 Jun 25. pii: 1805376115. doi:, 10.1073/pnas.1805376115. PMID:29941605[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Born D, Reuter L, Mersdorf U, Mueller M, Fischer MG, Meinhart A, Reinstein J. Capsid protein structure, self-assembly, and processing reveal morphogenesis of the marine virophage mavirus. Proc Natl Acad Sci U S A. 2018 Jun 25. pii: 1805376115. doi:, 10.1073/pnas.1805376115. PMID:29941605 doi:http://dx.doi.org/10.1073/pnas.1805376115
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