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| <StructureSection load='6qeq' size='340' side='right'caption='[[6qeq]], [[Resolution|resolution]] 1.90Å' scene=''> | | <StructureSection load='6qeq' size='340' side='right'caption='[[6qeq]], [[Resolution|resolution]] 1.90Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[6qeq]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/"enterococcus_proteiformis"_thiercelin_and_jouhaud_1903 "enterococcus proteiformis" thiercelin and jouhaud 1903]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6QEQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6QEQ FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6qeq]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Enterococcus_faecalis Enterococcus faecalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6QEQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6QEQ FirstGlance]. <br> |
- | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9Å</td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">pcfF, DAI13_16755 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1351 "Enterococcus proteiformis" Thiercelin and Jouhaud 1903])</td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6qeq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6qeq OCA], [http://pdbe.org/6qeq PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6qeq RCSB], [http://www.ebi.ac.uk/pdbsum/6qeq PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6qeq ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6qeq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6qeq OCA], [https://pdbe.org/6qeq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6qeq RCSB], [https://www.ebi.ac.uk/pdbsum/6qeq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6qeq ProSAT]</span></td></tr> |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/Q5G3N6_ENTFL Q5G3N6_ENTFL] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Enterococcus proteiformis thiercelin and jouhaud 1903]] | + | [[Category: Enterococcus faecalis]] |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Berntsson, R P.A]] | + | [[Category: Berntsson RPA]] |
- | [[Category: Rehman, S]] | + | [[Category: Rehman S]] |
- | [[Category: Accessory factor]]
| + | |
- | [[Category: Dna binding protein]]
| + | |
| Structural highlights
Function
Q5G3N6_ENTFL
Publication Abstract from PubMed
The conjugative plasmid pCF10 from Enterococcus faecalis encodes a Type 4 Secretion System required for plasmid transfer. The accessory factor PcfF and relaxase PcfG initiate pCF10 transfer by forming the catalytically active relaxosome at the plasmid's origin-of-transfer (oriT) sequence. Here, we report the crystal structure of the homo-dimeric PcfF, composed of an N-terminal DNA binding Ribbon-Helix-Helix (RHH) domain and a C-terminal stalk domain. We identified key residues in the RHH domain that are responsible for binding pCF10's oriT sequence in vitro, and further showed that PcfF bends the DNA upon oriT binding. By mutational analysis and pull-down experiments, we identified residues in the stalk domain that contribute to interaction with PcfG. PcfF variant proteins defective in oriT or PcfG binding attenuated plasmid transfer in vivo, but also suggested that intrinsic or extrinsic factors might modulate relaxosome assembly. We propose that PcfF initiates relaxosome assembly by binding oriT and inducing DNA bending, which serves to recruit PcfG as well as extrinsic factors necessary for optimal plasmid processing and engagement with the pCF10 transfer machine.
Enterococcal PcfF Is a Ribbon-Helix-Helix Protein That Recruits the Relaxase PcfG Through Binding and Bending of the oriT Sequence.,Rehman S, Li YG, Schmitt A, Lassinantti L, Christie PJ, Berntsson RP Front Microbiol. 2019 May 7;10:958. doi: 10.3389/fmicb.2019.00958. eCollection, 2019. PMID:31134011[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Rehman S, Li YG, Schmitt A, Lassinantti L, Christie PJ, Berntsson RP. Enterococcal PcfF Is a Ribbon-Helix-Helix Protein That Recruits the Relaxase PcfG Through Binding and Bending of the oriT Sequence. Front Microbiol. 2019 May 7;10:958. doi: 10.3389/fmicb.2019.00958. eCollection, 2019. PMID:31134011 doi:http://dx.doi.org/10.3389/fmicb.2019.00958
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