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| | <StructureSection load='6uf6' size='340' side='right'caption='[[6uf6]], [[Resolution|resolution]] 2.20Å' scene=''> | | <StructureSection load='6uf6' size='340' side='right'caption='[[6uf6]], [[Resolution|resolution]] 2.20Å' scene=''> |
| | == Structural highlights == | | == Structural highlights == |
| - | <table><tr><td colspan='2'>[[6uf6]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacsu Bacsu]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6UF6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6UF6 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6uf6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis_subsp._subtilis_str._168 Bacillus subtilis subsp. subtilis str. 168]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6UF6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6UF6 FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2Å</td></tr> |
| - | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
| - | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[6uex|6uex]], [[6uf5|6uf5]], [[6uf3|6uf3]]</td></tr>
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6uf6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6uf6 OCA], [https://pdbe.org/6uf6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6uf6 RCSB], [https://www.ebi.ac.uk/pdbsum/6uf6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6uf6 ProSAT]</span></td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">tagU, lytR, BSU35650 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224308 BACSU])</td></tr>
| + | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6uf6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6uf6 OCA], [http://pdbe.org/6uf6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6uf6 RCSB], [http://www.ebi.ac.uk/pdbsum/6uf6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6uf6 ProSAT]</span></td></tr> | + | |
| | </table> | | </table> |
| | == Function == | | == Function == |
| - | [[http://www.uniprot.org/uniprot/TAGU_BACSU TAGU_BACSU]] May catalyze the final step in cell wall teichoic acid biosynthesis, the transfer of the anionic cell wall polymers (APs) from their lipid-linked precursor to the cell wall peptidoglycan (PG).[HAMAP-Rule:MF_01140]<ref>PMID:21964069</ref> | + | [https://www.uniprot.org/uniprot/TAGU_BACSU TAGU_BACSU] May catalyze the final step in cell wall teichoic acid biosynthesis, the transfer of the anionic cell wall polymers (APs) from their lipid-linked precursor to the cell wall peptidoglycan (PG).[HAMAP-Rule:MF_01140]<ref>PMID:21964069</ref> |
| | <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| | == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| | __TOC__ | | __TOC__ |
| | </StructureSection> | | </StructureSection> |
| - | [[Category: Bacsu]] | + | [[Category: Bacillus subtilis subsp. subtilis str. 168]] |
| | [[Category: Large Structures]] | | [[Category: Large Structures]] |
| - | [[Category: Li, F K.K]] | + | [[Category: Li FKK]] |
| - | [[Category: Strynadka, N C.J]] | + | [[Category: Strynadka NCJ]] |
| - | [[Category: Cpsa]]
| + | |
| - | [[Category: Lytr]]
| + | |
| - | [[Category: Psr]]
| + | |
| - | [[Category: Transferase]]
| + | |
| Structural highlights
Function
TAGU_BACSU May catalyze the final step in cell wall teichoic acid biosynthesis, the transfer of the anionic cell wall polymers (APs) from their lipid-linked precursor to the cell wall peptidoglycan (PG).[HAMAP-Rule:MF_01140][1]
Publication Abstract from PubMed
Gram-positive bacteria, including major clinical pathogens such as Staphylococcus aureus, are becoming increasingly drug-resistant. Their cell wall is composed of a thick layer of peptidoglycan (PG) modified by the attachment of wall teichoic acid (WTA), an anionic glycopolymer that is linked to pathogenicity and regulation of cell division and PG synthesis. The transfer of WTA from lipid carriers to PG, catalyzed by the LytR-CpsA-Psr (LCP) enzyme family, offers a unique extracellular target for the development of new anti-infective agents. Inhibitors of LCP enzymes have the potential to manage a wide range of bacterial infections as the target enzymes are implicated in the assembly of many other bacterial cell wall polymers including capsular polysaccharide of streptococcal species and arabinogalactan of mycobacterial species. In this study, we present the first crystal structure of S. aureus LcpA with bound substrate at 1.9 A resolution and those of Bacillus subtilis LCP enzymes, TagT, TagU and TagV, in the apo form at 1.6-2.8 A resolution. The structures of these WTA transferases provide new insight into the binding of lipid-linked WTA and enable assignment of the catalytic roles of conserved active site residues. Furthermore, we identified potential subsites for binding the saccharide core of PG using computational docking experiments, and multi-angle light scattering experiments disclosed novel oligomeric states of the LCP enzymes. The crystal structures and modeled substrate-bound complexes of the LCP enzymes reported here provide insights into key features linked to substrate binding and catalysis and may aid the structure-guided design of specific LCP inhibitors.
Crystallographic analysis of Staphylococcus aureus LcpA, the primary wall teichoic acid ligase.,Li FKK, Rosell FI, Gale RT, Simorre JP, Brown ED, Strynadka NCJ J Biol Chem. 2020 Jan 22. pii: RA119.011469. doi: 10.1074/jbc.RA119.011469. PMID:31969390[2]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Kawai Y, Marles-Wright J, Cleverley RM, Emmins R, Ishikawa S, Kuwano M, Heinz N, Bui NK, Hoyland CN, Ogasawara N, Lewis RJ, Vollmer W, Daniel RA, Errington J. A widespread family of bacterial cell wall assembly proteins. EMBO J. 2011 Sep 30. doi: 10.1038/emboj.2011.358. PMID:21964069 doi:10.1038/emboj.2011.358
- ↑ Li FKK, Rosell FI, Gale RT, Simorre JP, Brown ED, Strynadka NCJ. Crystallographic analysis of Staphylococcus aureus LcpA, the primary wall teichoic acid ligase. J Biol Chem. 2020 Jan 22. pii: RA119.011469. doi: 10.1074/jbc.RA119.011469. PMID:31969390 doi:http://dx.doi.org/10.1074/jbc.RA119.011469
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