7xz6
From Proteopedia
(Difference between revisions)
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==GPR119-Gs-APD668 complex== | ==GPR119-Gs-APD668 complex== | ||
- | <StructureSection load='7xz6' size='340' side='right'caption='[[7xz6]]' scene=''> | + | <StructureSection load='7xz6' size='340' side='right'caption='[[7xz6]], [[Resolution|resolution]] 2.80Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7XZ6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7XZ6 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7xz6]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli], [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Lama_glama Lama glama]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7XZ6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7XZ6 FirstGlance]. <br> |
- | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7xz6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7xz6 OCA], [https://pdbe.org/7xz6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7xz6 RCSB], [https://www.ebi.ac.uk/pdbsum/7xz6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7xz6 ProSAT]</span></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 2.8Å</td></tr> |
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=I7J:propan-2-yl+4-[1-(2-fluoranyl-4-methylsulfonyl-phenyl)pyrazolo[3,4-d]pyrimidin-4-yl]oxypiperidine-1-carboxylate'>I7J</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7xz6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7xz6 OCA], [https://pdbe.org/7xz6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7xz6 RCSB], [https://www.ebi.ac.uk/pdbsum/7xz6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7xz6 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/GBG2_HUMAN GBG2_HUMAN] Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction (By similarity). | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Lysophosphatidylcholine (LPC) is an essential mediator in human lipid metabolism and is associated with a variety of diseases, but the exact identity of LPC receptors remains controversial. Through extensive biochemical and structural analyses, we have identified the orphan receptor GPR119 as the receptor for LPC. The structure of the GPR119-G-protein complex without any added ligands reveals a density map that fits well with LPC, which is further confirmed by mass spectrometry and functional studies. As LPCs are abundant on the cell membrane, their preoccupancy in the receptor may lead to 'constitutive activity' of GPR119. The structure of GPR119 bound to APD668, a clinical drug candidate for type 2 diabetes, reveals an exceedingly similar binding mode to LPC. Together, these data highlight structural evidence for LPC function in regulating glucose-dependent insulin secretion through direct binding and activation of GPR119, and provide structural templates for drug design targeting GPR119. | ||
+ | |||
+ | Structural identification of lysophosphatidylcholines as activating ligands for orphan receptor GPR119.,Xu P, Huang S, Guo S, Yun Y, Cheng X, He X, Cai P, Lan Y, Zhou H, Jiang H, Jiang Y, Xie X, Xu HE Nat Struct Mol Biol. 2022 Sep;29(9):863-870. doi: 10.1038/s41594-022-00816-5. , Epub 2022 Aug 15. PMID:35970999<ref>PMID:35970999</ref> | ||
+ | |||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 7xz6" style="background-color:#fffaf0;"></div> | ||
+ | |||
+ | ==See Also== | ||
+ | *[[Transducin 3D structures|Transducin 3D structures]] | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
+ | [[Category: Escherichia coli]] | ||
+ | [[Category: Homo sapiens]] | ||
+ | [[Category: Lama glama]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Huang S]] | [[Category: Huang S]] |
Current revision
GPR119-Gs-APD668 complex
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Categories: Escherichia coli | Homo sapiens | Lama glama | Large Structures | Huang S | Jiang Y | Xu HE | Xu P