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| <StructureSection load='3t1e' size='340' side='right'caption='[[3t1e]], [[Resolution|resolution]] 3.30Å' scene=''> | | <StructureSection load='3t1e' size='340' side='right'caption='[[3t1e]], [[Resolution|resolution]] 3.30Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[3t1e]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Ndv Ndv]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3T1E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3T1E FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[3t1e]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Newcastle_disease_virus_(STRAIN_AUSTRALIA-VICTORIA/32) Newcastle disease virus (STRAIN AUSTRALIA-VICTORIA/32)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3T1E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3T1E FirstGlance]. <br> |
- | </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">HN ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=11177 NDV])</td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.301Å</td></tr> |
- | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Exo-alpha-sialidase Exo-alpha-sialidase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.18 3.2.1.18] </span></td></tr>
| + | |
| <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3t1e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3t1e OCA], [https://pdbe.org/3t1e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3t1e RCSB], [https://www.ebi.ac.uk/pdbsum/3t1e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3t1e ProSAT]</span></td></tr> | | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3t1e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3t1e OCA], [https://pdbe.org/3t1e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3t1e RCSB], [https://www.ebi.ac.uk/pdbsum/3t1e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3t1e ProSAT]</span></td></tr> |
| </table> | | </table> |
| == Function == | | == Function == |
- | [[https://www.uniprot.org/uniprot/HN_NDVA HN_NDVA]] Attaches the virus to sialic acid-containing cell receptors and thereby initiating infection. Binding of HN protein to the receptor induces a conformational change that allows the F protein to trigger virion/cell membranes fusion (By similarity). Neuraminidase activity ensures the efficient spread of the virus by dissociating the mature virions from the neuraminic acid containing glycoproteins.
| + | [https://www.uniprot.org/uniprot/HN_NDVA HN_NDVA] Attaches the virus to sialic acid-containing cell receptors and thereby initiating infection. Binding of HN protein to the receptor induces a conformational change that allows the F protein to trigger virion/cell membranes fusion (By similarity). Neuraminidase activity ensures the efficient spread of the virus by dissociating the mature virions from the neuraminic acid containing glycoproteins. |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Exo-alpha-sialidase]] | |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Ndv]]
| + | [[Category: Jardetzky TS]] |
- | [[Category: Jardetzky, T S]] | + | [[Category: Lamb RA]] |
- | [[Category: Lamb, R A]] | + | [[Category: Leser GP]] |
- | [[Category: Leser, G P]] | + | [[Category: Paterson RG]] |
- | [[Category: Paterson, R G]] | + | [[Category: Swanson K]] |
- | [[Category: Swanson, K]] | + | [[Category: Yuan P]] |
- | [[Category: Yuan, P]] | + | |
- | [[Category: Helix bundle]]
| + | |
- | [[Category: Beta-propeller]]
| + | |
- | [[Category: Ectodomain]]
| + | |
- | [[Category: Hemagglutinin]]
| + | |
- | [[Category: Hydrolase]]
| + | |
- | [[Category: Membrane protein]]
| + | |
- | [[Category: Neuraminidase]]
| + | |
| Structural highlights
Function
HN_NDVA Attaches the virus to sialic acid-containing cell receptors and thereby initiating infection. Binding of HN protein to the receptor induces a conformational change that allows the F protein to trigger virion/cell membranes fusion (By similarity). Neuraminidase activity ensures the efficient spread of the virus by dissociating the mature virions from the neuraminic acid containing glycoproteins.
Publication Abstract from PubMed
The paramyxovirus hemagglutinin-neuraminidase (HN) protein plays multiple roles in viral entry and egress, including binding to sialic acid receptors, activating the fusion (F) protein to activate membrane fusion and viral entry, and cleaving sialic acid from carbohydrate chains. HN is an oligomeric integral membrane protein consisting of an N-terminal transmembrane domain, a stalk region, and an enzymatically active neuraminidase (NA) domain. Structures of the HN NA domains have been solved previously; however, the structure of the stalk region has remained elusive. The stalk region contains specificity determinants for F interactions and activation, underlying the requirement for homotypic F and HN interactions in viral entry. Mutations of the Newcastle disease virus HN stalk region have been shown to affect both F activation and NA activities, but a structural basis for understanding these dual affects on HN functions has been lacking. Here, we report the structure of the Newcastle disease virus HN ectodomain, revealing dimers of NA domain dimers flanking the N-terminal stalk domain. The stalk forms a parallel tetrameric coiled-coil bundle (4HB) that allows classification of extensive mutational data, providing insight into the functional roles of the stalk region. Mutations that affect both F activation and NA activities map predominantly to the 4HB hydrophobic core, whereas mutations that affect only F-protein activation map primarily to the 4HB surface. Two of four NA domains interact with the 4HB stalk, and residues at this interface in both the stalk and NA domain have been implicated in HN function.
Structure of the Newcastle disease virus hemagglutinin-neuraminidase (HN) ectodomain reveals a four-helix bundle stalk.,Yuan P, Swanson KA, Leser GP, Paterson RG, Lamb RA, Jardetzky TS Proc Natl Acad Sci U S A. 2011 Sep 6;108(36):14920-5. Epub 2011 Aug 22. PMID:21873198[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
See Also
References
- ↑ Yuan P, Swanson KA, Leser GP, Paterson RG, Lamb RA, Jardetzky TS. Structure of the Newcastle disease virus hemagglutinin-neuraminidase (HN) ectodomain reveals a four-helix bundle stalk. Proc Natl Acad Sci U S A. 2011 Sep 6;108(36):14920-5. Epub 2011 Aug 22. PMID:21873198 doi:10.1073/pnas.1111691108
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