8xyf

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Current revision (13:59, 1 January 2025) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 8xyf is ON HOLD until 2026-01-19
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==Crystal structure of Holo-PlyGRCS, a bacteriophage Endolysin in complex with Cold shock protein C==
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<StructureSection load='8xyf' size='340' side='right'caption='[[8xyf]], [[Resolution|resolution]] 1.67&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[8xyf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12] and [https://en.wikipedia.org/wiki/Staphylococcus_phage_GRCS Staphylococcus phage GRCS]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8XYF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8XYF FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.67&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8xyf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8xyf OCA], [https://pdbe.org/8xyf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8xyf RCSB], [https://www.ebi.ac.uk/pdbsum/8xyf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8xyf ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/W6EBY7_9CAUD W6EBY7_9CAUD]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Staphylococcus aureus causes a wide range of infections, from mild skin conditions to severe, life-threatening diseases. Bacteriophage endolysins exhibit a selective capacity to degrade the peptidoglycan layer of Gram-positive bacteria, making promising biotherapeutic agents against antibiotic-resistant infections. PlyGRCS, a specific endolysin derived from S. aureus, comprises a catalytic CHAP domain and a cell-wall binding SH3_5 domain connected by a linker. Ca(2+) ions are essential for the CHAP domain's catalytic function. The crystal structure of PlyGRCS, determined in the absence of Ca(2+) and refined to a resolution of 1.67 A, revealed significant conformational changes in the Ca(2+) binding site. Antimicrobial assays with Ca(2+)-deficient PlyGRCS and mutants targeting key residues in the catalytic and Ca(2+) binding regions highlighted the importance of specific functional residues for lytic activity against methicillin-resistant Staphylococcus aureus (MRSA). These structural and microbial studies provide valuable insights into the critical residues contributing to PlyGRCS's bacteriolytic efficacy against MRSA.
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Authors:
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Structural Basis for the Essential Role of Ca(2+) in the Lytic Activity of Staphylococcus aureus PlyGRCS Endolysin Targeting Methicillin-Resistant Staphylococcus aureus.,Krishnappa G, Nagaraj H, SureshKumar HB, Mandal M, Padavattan S, Bahubali VH, Thiyagarajan S, Padmanabhan B Proteins. 2024 Dec 11. doi: 10.1002/prot.26777. PMID:39660753<ref>PMID:39660753</ref>
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Description:
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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<div class="pdbe-citations 8xyf" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Escherichia coli K-12]]
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[[Category: Large Structures]]
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[[Category: Staphylococcus phage GRCS]]
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[[Category: Gopinath K]]
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[[Category: Harshitha HN]]
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[[Category: Padmanabhan B]]

Current revision

Crystal structure of Holo-PlyGRCS, a bacteriophage Endolysin in complex with Cold shock protein C

PDB ID 8xyf

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