Talk:Header of PDB file
From Proteopedia
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- | == RESOLVED: first record line not always being first line beginning MODEL or ATOM == | ||
- | [Original discussion thread follows] | ||
- | Currently the page says, "The header section is everything before the first record (line) beginning with MODEL or ATOM."<br> | ||
- | However, this doesn't seem to hold in the case of `4dqo`. | ||
- | |||
- | The transition under discussion in 4dqo: | ||
- | |||
- | <pre> | ||
- | CISPEP 3 TYR L 140 PRO L 141 0 1.32 | ||
- | CRYST1 81.054 207.561 87.617 90.00 90.00 90.00 C 2 2 21 8 | ||
- | ORIGX1 1.000000 0.000000 0.000000 0.00000 | ||
- | ORIGX2 0.000000 1.000000 0.000000 0.00000 | ||
- | ORIGX3 0.000000 0.000000 1.000000 0.00000 | ||
- | SCALE1 0.012337 0.000000 0.000000 0.00000 | ||
- | SCALE2 0.000000 0.004818 0.000000 0.00000 | ||
- | SCALE3 0.000000 0.000000 0.011413 0.00000 | ||
- | HETATM 1 N PCA H 1 44.170 -71.086 5.548 1.00 97.78 N | ||
- | ANISOU 1 N PCA H 1 10580 13233 13340 2173 -2005 1071 N | ||
- | HETATM 2 CA PCA H 1 44.225 -69.663 5.234 1.00 89.46 C | ||
- | ANISOU 2 CA PCA H 1 9354 12326 12309 1894 -2018 1072 C | ||
- | HETATM 3 CB PCA H 1 45.463 -69.346 4.405 1.00 98.69 C | ||
- | ANISOU 3 CB PCA H 1 10039 13689 13769 1971 -1880 1197 C | ||
- | HETATM 4 CG PCA H 1 45.903 -70.666 3.805 1.00107.40 C | ||
- | ANISOU 4 CG PCA H 1 11077 14738 14994 2346 -1635 1206 C | ||
- | HETATM 5 CD PCA H 1 45.177 -71.668 4.659 1.00109.20 C | ||
- | ANISOU 5 CD PCA H 1 11683 14759 15048 2454 -1782 1160 C | ||
- | HETATM 6 OE PCA H 1 45.443 -72.868 4.613 1.00118.27 O | ||
- | ANISOU 6 OE PCA H 1 12892 15781 16265 2715 -1696 1171 O | ||
- | HETATM 7 C PCA H 1 42.988 -69.278 4.442 1.00 75.35 C | ||
- | ANISOU 7 C PCA H 1 7847 10483 10298 1784 -1737 854 C | ||
- | HETATM 8 O PCA H 1 43.060 -68.512 3.484 1.00 74.93 O | ||
- | ANISOU 8 O PCA H 1 7620 10553 10298 1710 -1543 836 O | ||
- | HETATM 9 HA PCA H 1 44.257 -69.149 6.067 1.00107.35 H | ||
- | HETATM 10 HB2 PCA H 1 45.249 -68.686 3.713 1.00118.43 H | ||
- | HETATM 11 HB3 PCA H 1 46.170 -68.982 4.978 1.00118.43 H | ||
- | HETATM 12 HG2 PCA H 1 45.652 -70.726 2.859 1.00128.89 H | ||
- | HETATM 13 HG3 PCA H 1 46.872 -70.781 3.894 1.00128.89 H | ||
- | ATOM 14 N GLU H 2 41.849 -69.824 4.855 1.00 66.07 N | ||
- | ANISOU 14 N GLU H 2 7099 9123 8881 1769 -1722 709 N | ||
- | </pre> | ||
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- | Should there at least be a footnote that there are some other possibilities?<br> | ||
- | Or add qualifier of `Typically,`? <br> | ||
- | Or change to after the `CRYST1`/`ORIGX`/`SCALE` section?<br> | ||
- | [[User:Wayne Decatur|Wayne Decatur]] 17:24, 23 January 2025 (UTC) | ||
- | |||
- | <strong>Resolved:</strong> After this was posted, the article was edited to include that `HETATM` can signal the start of coordinate record section. |